Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1144 |
Symbol | |
ID | 1219959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1200072 |
End bp | 1200644 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637237513 |
Product | hypothetical protein |
Protein accession | NP_519265 |
Protein GI | 17545863 |
COG category | [R] General function prediction only |
COG ID | [COG1064] Zn-dependent alcohol dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.110241 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGTCCAG CCGTCGTTCC CGATGATCCG CACGCGCTCA CGGCGCCATC GCCGTGGGTG GTGCGCTGGG CCGCACCGCT GCCGGCCGGC GCGCGCGTGC TCGACGTGGC CTGCGGCAGC GGCCGGCATG TACGCTGGCT GGCGGCGCGC GGCCTGCGCG TGACCGGCAT CGATCGGGAT GCCGACGCGC TGTCGGGCCT GTCGGAGGCT GCCGACACCC TTATCGCCGA CATCGAGGAC GGCCTGTGGC CGTTGCCGGC CGAGGCCGTC TTCGATGCCG TGGTCGTCAC CAACTATCTG TACCGCCCGC TCTGGCCGCG CCTGCTGGCC TGCGTCGCGC CGGGCGGCCG GCTGATCTAC GAAACCTTCG CGGTCGGAAA CGAAACGGTC GGAAAACCGT CCAACCCGGC ATTCCTGCTG GCGCCGGGCG AACTGCTCGA AGCCGTGCGC GGCCAGCTGC GCGTGATCGG CTACGAAGAC GGCTTTATCG CGGCGCCGCG GGAGGCTTAC GTGCAGCGCC TCTGCGCGGT TCGCGAATCG GCAGGGGCGC AGGCCCGGCG CTACGCACTT TGA
|
Protein sequence | MCPAVVPDDP HALTAPSPWV VRWAAPLPAG ARVLDVACGS GRHVRWLAAR GLRVTGIDRD ADALSGLSEA ADTLIADIED GLWPLPAEAV FDAVVVTNYL YRPLWPRLLA CVAPGGRLIY ETFAVGNETV GKPSNPAFLL APGELLEAVR GQLRVIGYED GFIAAPREAY VQRLCAVRES AGAQARRYAL
|
| |