Gene RSc1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1144 
Symbol 
ID1219959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1200072 
End bp1200644 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content71% 
IMG OID637237513 
Producthypothetical protein 
Protein accessionNP_519265 
Protein GI17545863 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.110241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCCAG CCGTCGTTCC CGATGATCCG CACGCGCTCA CGGCGCCATC GCCGTGGGTG 
GTGCGCTGGG CCGCACCGCT GCCGGCCGGC GCGCGCGTGC TCGACGTGGC CTGCGGCAGC
GGCCGGCATG TACGCTGGCT GGCGGCGCGC GGCCTGCGCG TGACCGGCAT CGATCGGGAT
GCCGACGCGC TGTCGGGCCT GTCGGAGGCT GCCGACACCC TTATCGCCGA CATCGAGGAC
GGCCTGTGGC CGTTGCCGGC CGAGGCCGTC TTCGATGCCG TGGTCGTCAC CAACTATCTG
TACCGCCCGC TCTGGCCGCG CCTGCTGGCC TGCGTCGCGC CGGGCGGCCG GCTGATCTAC
GAAACCTTCG CGGTCGGAAA CGAAACGGTC GGAAAACCGT CCAACCCGGC ATTCCTGCTG
GCGCCGGGCG AACTGCTCGA AGCCGTGCGC GGCCAGCTGC GCGTGATCGG CTACGAAGAC
GGCTTTATCG CGGCGCCGCG GGAGGCTTAC GTGCAGCGCC TCTGCGCGGT TCGCGAATCG
GCAGGGGCGC AGGCCCGGCG CTACGCACTT TGA
 
Protein sequence
MCPAVVPDDP HALTAPSPWV VRWAAPLPAG ARVLDVACGS GRHVRWLAAR GLRVTGIDRD 
ADALSGLSEA ADTLIADIED GLWPLPAEAV FDAVVVTNYL YRPLWPRLLA CVAPGGRLIY
ETFAVGNETV GKPSNPAFLL APGELLEAVR GQLRVIGYED GFIAAPREAY VQRLCAVRES
AGAQARRYAL