| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1108 |
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| Symbol | |
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| ID | 1219920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1165370 |
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| End bp | 1166095 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637237474 |
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| Product | transcriptional regulatory DNA-binding transcription regulator protein |
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| Protein accession | NP_519229 |
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| Protein GI | 17545827 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.110935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.12151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGCGGGA TGCTGACGTC GATCGCGGGG CGTGGCATTC CGCTTGGTGG TATCTGCACG
GGCGCCTATG CGCTGATGTC GAGCCAGTTG CTCGACGGAT ACCGCTGCTC CATCCATTGG
GAGAACCGGG CGGCGCTGCA GGATCCGTTT CCGCTGGCGC AGTTCGCCGA TGAACTGTTC
TGCGTCGACC GCGACCGGCT CACATGCACG GGGGGCACTG CACCGATCGA CATGATGTTG
AATCTCGTCG GCCTGCGCTT CCGCCAGAGG ATGGCCGCAC AGGTTGCTGA ACAGTTCATT
CTCGAGCGCA TCCGCGGCAC GACCGACGTG CAGCCGATAC CGGTTGACGT GCAGCCGATA
CCGGTTGACG TGCAGCCGAT ACCGGTTGAC GTGCGGGTGG GTCTCCTGCG AGCCGAACTG
ATCGAGGTGC TGCGATTGAT GGAAGTGAAC ATCGAGGAGC CACTGTCTCT CGAGGAGCTG
ACGCGGCTCG TGAATCTCTG GCAGCGACAT CTGCAGCGGA TGTTCAAGTT CTATCTGAAC
GTGTCGCCGA CGCACTACTA TCTGACGCTG CGCCTGAAGC GCGCGCGTGA CCTGCTTCGC
ACGACGAACG CGTCGATTGC CTGTGTGACG ACGGTCTGCG GATTCCATTC GCAGTGCCAT
TTCAGCAAGG CGTATCGCGC TCAATTTGGT TACGCACCCA GCCATGAGCG TCGGCTGCCG
GGTTAG
|
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| Protein sequence | MCGMLTSIAG RGIPLGGICT GAYALMSSQL LDGYRCSIHW ENRAALQDPF PLAQFADELF
CVDRDRLTCT GGTAPIDMML NLVGLRFRQR MAAQVAEQFI LERIRGTTDV QPIPVDVQPI
PVDVQPIPVD VRVGLLRAEL IEVLRLMEVN IEEPLSLEEL TRLVNLWQRH LQRMFKFYLN
VSPTHYYLTL RLKRARDLLR TTNASIACVT TVCGFHSQCH FSKAYRAQFG YAPSHERRLP
G
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