| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1093 |
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| Symbol | pcaK |
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| ID | 1219905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1150277 |
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| End bp | 1151641 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637237459 |
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| Product | 4-hydroxybenzoate transporter |
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| Protein accession | NP_519214 |
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| Protein GI | 17545812 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.818104 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCCC CAAGTCCCGT GATTGACGTC CGCGCCTGGC TCGACCGCCA GCGCTTTTCC
GCGTTCCAGT GGAGCGTGGT GCTGTTGTGC TTCTTCGTCG TCGCCATCGA CGGATTCGAT
ACGGCATGCG TCGGCTTCAT CGCGCCGGCG CTGGCGCAGG ATTGGCACAT CGGCCCCGCA
GTCCTGGGCA CCGTGTTCAG CGCCGGGCTG GCGGGGCTGA TGGTCGGCGC GCTGATCTTC
GGCCCGCTGG CCGACCGCAT CGGGCGCAAG CAGACGCTGC TGTTCACGGT CGGGGCCTTC
GGCCTCGCGA GCGTGCTGTC GGCGTTCGCG CCGTCGGTCG GCGCGCTGGT CGCGCTGCGC
TTCCTCACCG GGCTCGGGCT GGGCGGGGCG ATGCCGAACG CCATCGCCCT GACCTCGGAG
TACTGCCCCG AGCGCCGCCG CGCGTTCCTG ACCACCGTGA TGTTCTGCGG CTTCACGCTG
GGGTCGGGTT TCGGCGGCAT CGTCGCGGCC CAGCTGGTGC CGGAGTTCGG CTGGCGCAGC
GTGCTGCTGT TCGGCGGCGT GATCCCGCTG TTGCTGCTGC CGGTGATGGT GTTCGCGCTG
CCCGAGTCGG TCCGCTACCT GGTGGCCAAG GGCGGACAGA GCGCCGCGGT CGGCCGGCTG
CTCAACCGGA TCGCGCCGGT GCAGGTCACA CCGGACACGC GCTTCGTGCT CCATGAAACG
GCGGCGAAAG GCGCGCCGGG GTCGCCGGTC AGGCAGCTCT TCCTGCCCGC GTTCCGGACG
GGCACGTTGC TGCTGTGGTC GGTGTTCTTC ATGAGCCTGC TGATCGTCTA TCTGATGACG
AACTGGCTGC CCACGCTGAT CCATTCGGGC GGCGTGGCGC TGGCCCTGGC GTCGCGCATC
GCGGTGATGT ACCAGCTTGG CGGGACGGTC GGCGCGCTGG TCATCGGCCG CATGATGGAC
CGGTATCCCG CCACGGTGGT GCTGTGCTGC ACGTATGGGC TCGGTGCCGG CTTCCTGGTG
CTGACCGGCG TGTCGCAGGG GACGATGCTG GCCATCGCCG TCACGGGCGT GGGCTTCTGC
ATCAGCGGCT CGCAGATCGG CGCCAATGCG TTCGCCGCGC AGTTCTACCC GACCGCGAGC
CGCGTGACGG GGATCAGCTG GGCGCTCGGC ATCGGGCGCC TCGGCTCGGT GTGCGGCGCG
CTGATCGGCG GCGTGCTGCT GGCCGCGAAC ATCGGGTTCC AGCTGCTGTT CCTGCTGGTC
GCCGTGCCGG CCGCCATCGC ATCGCTCGCG ATCTTCCTGT GCGGCGCGCA GGCCCGGCAC
GTCGAGACGC AGGGCGCCCT GCCCGCCGTC ACCGAAGGCG CCTGA
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| Protein sequence | MLPPSPVIDV RAWLDRQRFS AFQWSVVLLC FFVVAIDGFD TACVGFIAPA LAQDWHIGPA
VLGTVFSAGL AGLMVGALIF GPLADRIGRK QTLLFTVGAF GLASVLSAFA PSVGALVALR
FLTGLGLGGA MPNAIALTSE YCPERRRAFL TTVMFCGFTL GSGFGGIVAA QLVPEFGWRS
VLLFGGVIPL LLLPVMVFAL PESVRYLVAK GGQSAAVGRL LNRIAPVQVT PDTRFVLHET
AAKGAPGSPV RQLFLPAFRT GTLLLWSVFF MSLLIVYLMT NWLPTLIHSG GVALALASRI
AVMYQLGGTV GALVIGRMMD RYPATVVLCC TYGLGAGFLV LTGVSQGTML AIAVTGVGFC
ISGSQIGANA FAAQFYPTAS RVTGISWALG IGRLGSVCGA LIGGVLLAAN IGFQLLFLLV
AVPAAIASLA IFLCGAQARH VETQGALPAV TEGA
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