Gene RSc1023 details

Gene Information

• Locus tag: RSc1023
• Symbol: hscB
• ID: 1219832
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 1075278
• End bp: 1075808
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637237386
• Product: co-chaperone HscB
• Protein accession: NP_519144
• Protein GI: 17545742
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1076] DnaJ-domain-containing proteins 1
• TIGRFAM ID: [TIGR00714] Fe-S protein assembly co-chaperone HscB

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.187887
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.466989
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAATTCCG CGAGCGATAC GCACTTTTCC CTGTTCGGCC TGCCCGAGCA TTTCGAGGTC 
GACGACGGCG CGCTGAACGC CGCGTACCGC ACCGTGCAAT CGCGGGCGCA CCCGGACCGC 
CATGCGCATG CCAGCGATGC CGAACGCCGC GTCGCCATGC AATGGGCCAC GCGCGCCAAC 
GAGGCCTACC AGACCCTGCG CGATCCGCTC AAGCGGGCGA CCTATCTGCT GCACCTGCGC 
GGCGTCGACG TGCAGGCCGA GAACAACACG GCCATGCCGC CGGCCTTCCT GATGCAGCAG 
CTGGAATGGC GCGAGTCGCT GGCCGATGCC AAGGCCGCCG GCGACCTGGA CGCGCTGGAC 
GACCTGCTGG CCATGCTGCG CGGGGAAAAG CGCGCCCGCT ATCAGACGCT GGCAGGGCTG 
CTGAATGGCG GCGGCCACGA CGCGGCAGCG GCCGATGCCG TGCGCCAGCT CATGTTCATC 
GAAAAAATCG AGCGGGATAC CGCCGAGGCG ATCGACCGGC TGGACGACTA G 

 

Protein sequence

MNSASDTHFS LFGLPEHFEV DDGALNAAYR TVQSRAHPDR HAHASDAERR VAMQWATRAN 
EAYQTLRDPL KRATYLLHLR GVDVQAENNT AMPPAFLMQQ LEWRESLADA KAAGDLDALD 
DLLAMLRGEK RARYQTLAGL LNGGGHDAAA ADAVRQLMFI EKIERDTAEA IDRLDD