| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1016 |
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| Symbol | |
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| ID | 1219825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1069347 |
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| End bp | 1070918 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637237379 |
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| Product | ABC transporter ATP-binding protein |
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| Protein accession | NP_519137 |
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| Protein GI | 17545735 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.339278 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCG TCCCTGCACC GCGCACACCG CTGCTGCGGG CGTCCGCCCT CAGCAAGCAC
TACGCCGCGC CTGTGCTGCG CGATGTCGAT CTCGACGTCT ACGCGGGCGA GGTGCTGGCC
TTGACCGGCG AGAACGGCGC GGGCAAGAGC ACCCTGTCCA AGATCCTGTG CGGACTGGAG
ACGCCGGCCT CCGGGTCGAT GTCGCTGGCC GGGCGCCTGT TCGCGCCCGC CTCGCGCTGC
GACGCCGAGA CCCTCGGCGT GCGCATGGTG CTGCAAGAGC TGAACATGGT GCCCACGCTG
ACGGTGGCCG AGAACCTCTT CCTCGGCAAC CTGCCGCGCC GCCGGGGCTG GATCGACCGC
CCCGCGCTGC AGCGCCAGGC GGAACAGGCG CTGGCGCGGA TCGGACTCGA CCTAGACCCC
CGCCTGCCCG TGCACCGGCT CGGCATCGGG CACCGGCAGA TGATCGAGAT CGCCCGCGCG
CTGGCCAGCG CCTGCCGGGT CCTGGTGCTC GACGAGCCGA CTGCCATGCT CAGCGCGCAC
GAGAGCGCGA CCCTGTTCGC CCGCATCGAT GCGCTGCGCC GCGACGGCGT GGCCGTCGTC
TACATCTCGC ACCGGCTCGA CGAGCTGGCG CGCATCGCCG ACCGCATCGT CGTGCTGCGC
GACGGCCGGC TGATCACCGA TGCGCCCGCC GCCACGCTCA CGCAGGACGC GCTGATCCGG
GCCATGGTCG GACGCGAGCT GGCCGCGGAC ACCGGCGCAG AGCGCCCGGC CCGCGCGCCG
CGACCGCCCG ATACCGCGCC GACCCTGCGC GTGACCGGCC TGACCCGGGC ACCCGCGGTG
CACGATGTGT CGTTTGCCGT GGCGCCGGGC GAGATCTTCG GCATTGCCGG GCTGGTCGGC
GCCGGACGCA CCGAGCTGCT GCGGCTCATC TTCGGGGCGG ACCGTGCGGA CGCCGGCACC
ATCGAGACCG GAACGCCGCT GGCGCCACGG CGCATCCGCG CGCCGGGCGA TGCGGTGCGC
CATGGCATCG GCCTGCTCAC CGAAGACCGC AAGGACGAAG GCCTGCTGCT CGGCCTGCCG
ATCGCCGCCA ACATCGCCCT GGGCAACATG ACCGGCGCAG CACGGCGCGG CTGGCTGCAG
CCGGCGCGCG AGCGGGCGCA GGCGCGGCGC CACATCGAGG CGCTGCGCAT CCGCTGCGCG
GGGCCGGAGC AGGCGGTCGG CGAGCTGTCC GGCGGCAACC AGCAGAAGGT GGCGATCGCC
CGCTGGCTGG AGCGCGACGC CCCGGTGCTG CTGTTCGACG AGCCCACGCG CGGCGTCGAC
GTGGGCGCCA AATTCGACAT CTACGCCCTG CTCGAAGGGC TGGCCGCGCA GGGCAAGGCC
CTGGTGGTGG TCTCCAGCGA CCTGCGCGAG CTGATGCAGG TCTGCGACCG CATCGGCGTG
ATGCGCGCGG GGCGGCTGAC GCAGATCTTC CGCCGCGACA GCTGGAGCCG GGATGCCCTG
CTTGCCGCCG CCTTCGGCGA ATGTCCCCCG CCGTCCTCCA CGTCCGCCCC GGAGACCGCC
GATGCGTTCT GA
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| Protein sequence | MTTVPAPRTP LLRASALSKH YAAPVLRDVD LDVYAGEVLA LTGENGAGKS TLSKILCGLE
TPASGSMSLA GRLFAPASRC DAETLGVRMV LQELNMVPTL TVAENLFLGN LPRRRGWIDR
PALQRQAEQA LARIGLDLDP RLPVHRLGIG HRQMIEIARA LASACRVLVL DEPTAMLSAH
ESATLFARID ALRRDGVAVV YISHRLDELA RIADRIVVLR DGRLITDAPA ATLTQDALIR
AMVGRELAAD TGAERPARAP RPPDTAPTLR VTGLTRAPAV HDVSFAVAPG EIFGIAGLVG
AGRTELLRLI FGADRADAGT IETGTPLAPR RIRAPGDAVR HGIGLLTEDR KDEGLLLGLP
IAANIALGNM TGAARRGWLQ PARERAQARR HIEALRIRCA GPEQAVGELS GGNQQKVAIA
RWLERDAPVL LFDEPTRGVD VGAKFDIYAL LEGLAAQGKA LVVVSSDLRE LMQVCDRIGV
MRAGRLTQIF RRDSWSRDAL LAAAFGECPP PSSTSAPETA DAF
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