Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0988 |
Symbol | |
ID | 1219797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1038894 |
End bp | 1039631 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637237351 |
Product | hypothetical protein |
Protein accession | NP_519109 |
Protein GI | 17545707 |
COG category | [R] General function prediction only |
COG ID | [COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0169723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0507155 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACGC TCAAGCGCTT TGACGAAGAC GCCTATCGCA CCGAGTGCGG CGCCACGGTC GTCGCCGTGC ATCCCGAGGG CATCGAACTG GACCAGACCG TGTTCTACGC CCGCGGCGGC GGCCAGGCCG GCGACACCGG CACCCTGATC CTGCCCGACG GCCAGACCGT GGCGATCGCC GACACCGTCT ACCACGCCGA CCGCCTGGCC ATCCTGCATG TGCCGGCCGA TCCGGCCAAC CTGGGCCTGC TGGCGCCCGG CCTGCCGGTG TCCGCCGCGA TCGACTGGGC ACGCCGGTAC CGGCTAATGC GACTGCACAC CTGCCTGCAT CTGCTGGGCG CGCTGATCCC GGTGCCGGTC ACGGGCTGCG GCATCTCGCC GGACGCCGGC CGCATCGACT TCGACCTGCC CGAATCCACG CTCGAGCGCG AGACGCTGAC CGCGCAGCTC AATGCGCTGA TCGCGCGCGA CACGCCGGTG CGCATCGCCC TGATCACGCC GGAGGCCTTG GCCGCACAGC CGCAGTTGGT ACGCACCATC GGCGCTGCGC CGCCGGCGGG CGTGTCCGCC ATCCGCATCG TGGAGATCGA CGGCATCGAC CGTCAGCCCT GCGGCGGCAC CCACGTGCGC GCCACGGGCG AGATCGGTCG CGCCACCGTC ACCAAAATCG AAAAGAAGAG CCGCCAGAAC CGCCGCGTGG TGGTGGCGCT GGCCGATGAG ATCAGGAGCA CGCCATGA
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Protein sequence | MPTLKRFDED AYRTECGATV VAVHPEGIEL DQTVFYARGG GQAGDTGTLI LPDGQTVAIA DTVYHADRLA ILHVPADPAN LGLLAPGLPV SAAIDWARRY RLMRLHTCLH LLGALIPVPV TGCGISPDAG RIDFDLPEST LERETLTAQL NALIARDTPV RIALITPEAL AAQPQLVRTI GAAPPAGVSA IRIVEIDGID RQPCGGTHVR ATGEIGRATV TKIEKKSRQN RRVVVALADE IRSTP
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