Gene RSc0988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0988 
Symbol 
ID1219797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1038894 
End bp1039631 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content71% 
IMG OID637237351 
Producthypothetical protein 
Protein accessionNP_519109 
Protein GI17545707 
COG category[R] General function prediction only 
COG ID[COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0169723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0507155 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACGC TCAAGCGCTT TGACGAAGAC GCCTATCGCA CCGAGTGCGG CGCCACGGTC 
GTCGCCGTGC ATCCCGAGGG CATCGAACTG GACCAGACCG TGTTCTACGC CCGCGGCGGC
GGCCAGGCCG GCGACACCGG CACCCTGATC CTGCCCGACG GCCAGACCGT GGCGATCGCC
GACACCGTCT ACCACGCCGA CCGCCTGGCC ATCCTGCATG TGCCGGCCGA TCCGGCCAAC
CTGGGCCTGC TGGCGCCCGG CCTGCCGGTG TCCGCCGCGA TCGACTGGGC ACGCCGGTAC
CGGCTAATGC GACTGCACAC CTGCCTGCAT CTGCTGGGCG CGCTGATCCC GGTGCCGGTC
ACGGGCTGCG GCATCTCGCC GGACGCCGGC CGCATCGACT TCGACCTGCC CGAATCCACG
CTCGAGCGCG AGACGCTGAC CGCGCAGCTC AATGCGCTGA TCGCGCGCGA CACGCCGGTG
CGCATCGCCC TGATCACGCC GGAGGCCTTG GCCGCACAGC CGCAGTTGGT ACGCACCATC
GGCGCTGCGC CGCCGGCGGG CGTGTCCGCC ATCCGCATCG TGGAGATCGA CGGCATCGAC
CGTCAGCCCT GCGGCGGCAC CCACGTGCGC GCCACGGGCG AGATCGGTCG CGCCACCGTC
ACCAAAATCG AAAAGAAGAG CCGCCAGAAC CGCCGCGTGG TGGTGGCGCT GGCCGATGAG
ATCAGGAGCA CGCCATGA
 
Protein sequence
MPTLKRFDED AYRTECGATV VAVHPEGIEL DQTVFYARGG GQAGDTGTLI LPDGQTVAIA 
DTVYHADRLA ILHVPADPAN LGLLAPGLPV SAAIDWARRY RLMRLHTCLH LLGALIPVPV
TGCGISPDAG RIDFDLPEST LERETLTAQL NALIARDTPV RIALITPEAL AAQPQLVRTI
GAAPPAGVSA IRIVEIDGID RQPCGGTHVR ATGEIGRATV TKIEKKSRQN RRVVVALADE
IRSTP