| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0945 |
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| Symbol | pmbA |
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| ID | 1219753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 992921 |
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| End bp | 994294 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637237307 |
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| Product | putative PMBA protein (tlde protein) |
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| Protein accession | NP_519066 |
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| Protein GI | 17545664 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0171463 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACA CGCTCGATTC CAAGACCGAT TCCGTTTTTG CCTACCGCCG CGAGCGGCTC
GAGGAAATGG CTCGCGATGT GCTGCGCATT GCACGCGAAC TCGGCGCCAC CGATGCCGCC
ACGGAAATCT CCGAAGGCCA AGGCTTGTCG GTCACGGTGC GCAAGGGCGA GATCGAGACC
ATCGAGCAGA ACCGCGACAA GGTGGTCGGC GTGACGGTGA TGCTGGGCAA GAAGCGCGGC
AACGCCAGCA CCTCGGATTT TTCGCCGGCC GCGCTGCGCT CCACCGTCGA GGCGGCCTAC
AACATCGCGC GCTTCACCGC CGATGACGAC TGCGCCGGGC TGGCCGAAGA GGAATTGCTC
GAGCGCCAAC CGCGCGACCT GTCGCTGTAC CACCCGTGGA CGCTCGACGC CGAAGCCGCC
GTGGAGATCG CCCGTGCCGC CGAGGCCGCC GCCTTCGCGG TGAGCCCGAA GATCCGCAAC
AGCGACGGCG CCAGCGTGTC GGCGCAGCAT TCGCATTTCG TCCTGGCGAC CTCGCGCGGG
TTCCTGGGCG GCTATCCGTA TTCGCGGCAT TTCATTTCGT GCGCGCCGAT CGCCGGCTCG
GGCCAGCAGA TGCAGCGCGA CGACTGGTAT TCGTCCAAGC GCTCGCCCAA GGACCTGGCG
GCACCCGAGG CCATCGGCCA GTACGCTGCC GAGCGCGCGC TGGCGCGGCT CGCCGCGCGC
CGGCTGAGCA CCCGCAAGTG TCCGGTGCTG TTCGAGGCGC CGCTGGCGGC GGGCCTGCTG
GGCGCGTTCG TCCAGGCTGT GTCGGGCGGT GCGCTGTATC GCAAGTCGAC CTTCCTGCTC
GACTCGCTCG GCAAGGCAAT CTTCGCGCCG CACGTGCAGA TCAAGGAAGA CCCGCACGTG
CCCAGCGGGA TGGGCAGCGC GCCGTTCGAC GAGGAAGGCG TGCGCACGCA GCGCCGTGAC
GTGGTGAGGG ATGGCGTCGT CGAAGGCTAT TTCCTGTCGA CGTATTCCGC GCGCAAGCTG
GGCATGCAGA CCACCGGCAA CGCGGGCGGC TCGCACAACC TGACGCTGTT CTCCGACCGG
ACGCAGCCGG GCGACGATTT CGCCGGCATG CTGCGCCGCA TGGGCACGGG CCTGCTGGTG
ACGGAGCTGA TGGGGCAGGG CGTCAACTAT GTGACCGGCG ACTATTCGCG CGGCGCGTCG
GGCTACTGGG TGGAGAACGG CGTGATCCAG TACCCGGTCG AGGAGATCAC CATTGCCGGC
AACCTGCGCG ACATGTTCCG CCAGATCGTC GCCATCGGGG CGGATGCGCT GATCCGGGGC
ACCAAGGAAA CCGGTTCGAT CCTGATCGAG CAGATGACGA TCGCCGGCGA GTAA
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| Protein sequence | MSDTLDSKTD SVFAYRRERL EEMARDVLRI ARELGATDAA TEISEGQGLS VTVRKGEIET
IEQNRDKVVG VTVMLGKKRG NASTSDFSPA ALRSTVEAAY NIARFTADDD CAGLAEEELL
ERQPRDLSLY HPWTLDAEAA VEIARAAEAA AFAVSPKIRN SDGASVSAQH SHFVLATSRG
FLGGYPYSRH FISCAPIAGS GQQMQRDDWY SSKRSPKDLA APEAIGQYAA ERALARLAAR
RLSTRKCPVL FEAPLAAGLL GAFVQAVSGG ALYRKSTFLL DSLGKAIFAP HVQIKEDPHV
PSGMGSAPFD EEGVRTQRRD VVRDGVVEGY FLSTYSARKL GMQTTGNAGG SHNLTLFSDR
TQPGDDFAGM LRRMGTGLLV TELMGQGVNY VTGDYSRGAS GYWVENGVIQ YPVEEITIAG
NLRDMFRQIV AIGADALIRG TKETGSILIE QMTIAGE
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