| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0858 |
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| Symbol | |
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| ID | 1219666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 895137 |
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| End bp | 896387 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637237220 |
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| Product | bacteriophage-like protein |
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| Protein accession | NP_518979 |
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| Protein GI | 17545577 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0571682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGT TGCCTCATCT GGCGACACGC CTCTTTGGCG TGCCGCTGGC GATTGATCGC
CCCAAACTTG ACGTGATCCT GTCGGTGCTC GGCCCGCGCG TGGGCCTGGC CGGCCTGGCG
CCACCGGGCG ACTACACGCC GCCCGAACGG AATCCGGTCC GTGGCCATGC CCAGATCGCC
GTGATCCCGA TCCACGGCAC GCTGGTGCGG CGTACCGTGG GCCTGGAGGC CGAGTCAGGG
CTGGCCAGCT ACACCGCGAT CGGTGAACAG CTGGACGCGG CCCTGGCCGA CCCCGGCATC
GCCGCCATCC TGCTCGACGT CGACAGCCCA GGCGGCGAGT CCGGTGGGGT GTTTGATCTC
GCTGACCGCA TTCGCGTCGC CGCCGCCATC AAGCCCGTCT GGGCGGCGGC CAACGACATG
GCGTTCTCGG CCGCCTATGC GCTGGCCTGC GCCGCGTCGC GGGTCTTTGT CTCGCGCACC
GGCGGGGTTG GCTCGATTGG TGTCATCGCC ATGCACGTCG ACCAGTCCGT CAAGGACGCA
AAGGACGGCG TTCGCTACAC GGCGGTGTTT GCCGGCGCCC GCAAGAACGA CCTCAACCCA
CACGAGCCGA TCACCGACGA AGCGCAGGCG CAGCTGCAAG CCGAGGTGAG CCGCATCTAC
AGGCTGTTCG TCGCGACCGT GGGCAGCTAT CGCGGACTGT CGGCCGAGGC AGTGACGGCC
ACCGAGGCTG GGCTTTTCTT CGGGCAGGAC GCTGTCGCTG CCGGGCTGGC GGATGCCGTC
GGCACGTTCG ACGACGCGCT CGCCCAGCTC ACCGCATCCC TTTCTGTTCC CGCGCCGGTC
GCATCCGCGC GCACTCCCTC TCTCAACCTC CAGATGGACT GTTCCATGAA CACTCAACCT
GATCCCGCTG CTGTCAGCGT GCCGGCTGCG GACGCGATCG GCACCACCGC CCAACCACCG
GTTGTTGCTT CGCCGCCGGC AGCCTCCGTC GCCAGCCATA CCGACGCCGT GGAGATCGCG
CAGCTGTGCA CGCTGGCCGG TCGCACCGAC CTGATCGCAG GCTTCCTCGA AGCGCGCGCC
ACGCCCGAAC GCGTGCGCAG CCAACTGCTG GCCGCGCGTG CCGAGGCGTC GCCCGAGATC
GCCAGCCGTA TCGATCCGCA CGCGCAGGCG GTCTCTGCCG ATGCCAGCCA CCCGGCCTCT
CCCCGTAACC CGTTGCTCCA GGCCGTCAAG AAGCGCCTGG GCATCCAGTA A
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| Protein sequence | MTLLPHLATR LFGVPLAIDR PKLDVILSVL GPRVGLAGLA PPGDYTPPER NPVRGHAQIA
VIPIHGTLVR RTVGLEAESG LASYTAIGEQ LDAALADPGI AAILLDVDSP GGESGGVFDL
ADRIRVAAAI KPVWAAANDM AFSAAYALAC AASRVFVSRT GGVGSIGVIA MHVDQSVKDA
KDGVRYTAVF AGARKNDLNP HEPITDEAQA QLQAEVSRIY RLFVATVGSY RGLSAEAVTA
TEAGLFFGQD AVAAGLADAV GTFDDALAQL TASLSVPAPV ASARTPSLNL QMDCSMNTQP
DPAAVSVPAA DAIGTTAQPP VVASPPAASV ASHTDAVEIA QLCTLAGRTD LIAGFLEARA
TPERVRSQLL AARAEASPEI ASRIDPHAQA VSADASHPAS PRNPLLQAVK KRLGIQ
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