Gene RSc0733 details

Gene Information

• Locus tag: RSc0733
• Symbol: tolR
• ID: 1219539
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 780116
• End bp: 780550
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637237093
• Product: putative TOLR-related transport transmembrane protein
• Protein accession: NP_518854
• Protein GI: 17545452
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0848] Biopolymer transport protein
• TIGRFAM ID: [TIGR02801] TolR protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 0.670063
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTACCA TCCAGCGAAC GCGCCGCGCC CGACGGGCCA AGGCCGACAT CAACGTGGTG 
CCCTACATCG ACGTGATGCT GGTGCTGCTG GTCATCTTCA TGGTCGCGGC GCCGGTGGTG 
AACCCGGGCG TGGTCAACCT GCCGTCGGTG GCCAACGCCA CGCCGCAGCA GACCCAGCCG 
CCCATCGTCG TGACCATCAA GGGTGACGGC ACGATCCTTG CTCGCGTCAA GAGCGGCTCC 
GGCGCCACCG AGCAGAAGCT GGCGAACAAC CAGGAACTGC GCGCCTTCGT CAAGCAGCGC 
ACGGGAGAGA ATCCGGACCA GCCGGTGGTT ATCGCCGCGG ACAAGACGGT CCAGTACGAC 
CGCGTGCTGA CAGTGATGGG CGTGCTCAAA GGGGACGGCG TCAAGCGCGT CGGTCTGATG 
GTGAAGTCGC AATGA 

 

Protein sequence

MATIQRTRRA RRAKADINVV PYIDVMLVLL VIFMVAAPVV NPGVVNLPSV ANATPQQTQP 
PIVVTIKGDG TILARVKSGS GATEQKLANN QELRAFVKQR TGENPDQPVV IAADKTVQYD 
RVLTVMGVLK GDGVKRVGLM VKSQ