| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0709 |
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| Symbol | |
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| ID | 1219515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 757141 |
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| End bp | 758229 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637237069 |
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| Product | hypothetical protein |
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| Protein accession | NP_518830 |
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| Protein GI | 17545428 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.24101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTGA ACGCAGGGGG CGCGGTTGCG CCCCGTCATG AGTGGCATCC TGGCATCCAG
CTGTTGTTCC GCGGCGGGCA CGTCGCGCTC AACAGCATCG GCGTGGTGGC GGTGGCGGCC
GCGGTCGCAC TGTCGCTCAA CAGCGAGTGG CGAGCGATGG TCGCGCAGCG CGTTCTGCAT
TTCACGCCCG GCATGGAGGT CAGCCTGGCC GCCAATACGC CATCGCCGGC CGTCGCGGCC
AACGTGGAGC GGGTCGCCTT TGCGCCCGCC GCGGCATCGT CCGCCGATAC TGGTGCGGCG
CAGGCCGCCG CGCCCGCAGC CGAGGTGGCG CAGGCCGGTC CGGCTGCGGC TGCCGGCTGG
GACACGTTGT CGCACGTGCC ATCCGTGGCC GATCTCGCGG CGCAGATCCC GAACACGCAG
GTCGTACGCG ACGCGCGGGA TTCGGCGACC GCCGGTACGC CGCGCGAGCA GGCTGCCGTG
GCGGAATACA TTGCCCGCAA GTACCGTGTG GCGGCCACCG CCACCGGTCA GCTGGTGAAG
GCGGCCTATC AGACCGGCAA GGAAGTCGGC CTGGATCCGC TGCTGATCCT CGGCGTGATG
GCCATCGAGT CCAGCTTCAA TCCGTTCGCG GAAAGCGGCA TGGGCGCGCA GGGCCTGATG
CAGGTGATGA CCAAGGTCCA CCAGGACAAA TACGAAGTGA TGGGCGGCGT CGGTGCCGCG
CTCAACCCGT ATGCCAACAT CAAGGTCGGT GCGCTGGTGC TCAAGGATTG CATCGCCCGC
GCCGGCTCGA TCGAGGGTGG CCTCAAGCTG TATGTCGGCG CCGTCACGCA AGGTGACGGC
GGCTACGGCG GCAAGGTGCT GCAGGAGCGT TCGCGTCTGC GTCTGGTGGC CACCGGCCGC
AAGTCGCCGG TGACGATGGC GTCCGAGCGC GAGTCCGCCA AGCCGGCCGC GGTGGCGACG
CCGGTGGCAC CGGCATCGCA GACGCAGGCT GCCAAGCCTG TCGCGAAGCA GCCCATGGCC
GGCCAGCAGG AAGAAGCCAG CCTGGTCGAC GACAAGGCGC ACAGTCCGGA ACGTCAGGGC
CAGGCTTGA
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| Protein sequence | MELNAGGAVA PRHEWHPGIQ LLFRGGHVAL NSIGVVAVAA AVALSLNSEW RAMVAQRVLH
FTPGMEVSLA ANTPSPAVAA NVERVAFAPA AASSADTGAA QAAAPAAEVA QAGPAAAAGW
DTLSHVPSVA DLAAQIPNTQ VVRDARDSAT AGTPREQAAV AEYIARKYRV AATATGQLVK
AAYQTGKEVG LDPLLILGVM AIESSFNPFA ESGMGAQGLM QVMTKVHQDK YEVMGGVGAA
LNPYANIKVG ALVLKDCIAR AGSIEGGLKL YVGAVTQGDG GYGGKVLQER SRLRLVATGR
KSPVTMASER ESAKPAAVAT PVAPASQTQA AKPVAKQPMA GQQEEASLVD DKAHSPERQG
QA
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