Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0694 |
Symbol | |
ID | 1219499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 743056 |
End bp | 743796 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637237053 |
Product | hypothetical protein |
Protein accession | NP_518815 |
Protein GI | 17545413 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3187] Heat shock protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00754314 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCGCC CCGATCGTTC CAAGCCCAGT CTGCTGCAGA CGCCGCGTCG CGTGGTGCTG GCCGCGGCAG CCCTGGCCGC GCTGACGGCC GCCACCATCA TCGGCGCCGG CTGCATGACG ACACCCAAGG CAACCACGCC GGTTGCACCG GTCGCACGCA GCGATGCGGC ATCGGTCCCC GTCGCCGTTG TCGCTGCTTC TGCTGTTTCT GGTGTTTCCG GTGCGGTCGT GCCGGCCTCG ACGCCAACCC CGGCCCCGGC ATCGGCCGCT CCCAATCCCG GACAGGCTTC GCTGACGCAG GCGCAGGGCG AGGGACGTTC GCGCTTCGTT CTGGTGCGCT GGCAGGAGCC CGGTGCCGCG CCGAAAGAGC TGCCTCCGGC CGAAGGCGAT GGCGAGGATC CGTCGAACCC GCCCATCTCG ATTGAATTCA GTGCAGGCCT GGAAGCCGCC AGCGGCGTGG CCTCGGGCTA TTCCGGCTGC AACCGCTTCA CCGGGCCGTA CGAGAAACTC GTGTCGGGCA TGCGCTTTGG CGCGCTGGTG TCGACGCGCG TGGCCTGCGA TCCGGCGCGC ATGCAGCTGG AGAACGATTT CCTGGAGGCG TTGAAGTCGC CGCTGGCGAC GGTGGGCATG CAGCCTTCGT CCGCCGGCGC ACAGGGCCGC CAGGTGATCT GGAAGACCGC CGGCGGTGCA CTGCTGCAAT TCGCCGAGCA CCCGCTGCCG CCGCGCGGGC AGCCGCACTG A
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Protein sequence | MSRPDRSKPS LLQTPRRVVL AAAALAALTA ATIIGAGCMT TPKATTPVAP VARSDAASVP VAVVAASAVS GVSGAVVPAS TPTPAPASAA PNPGQASLTQ AQGEGRSRFV LVRWQEPGAA PKELPPAEGD GEDPSNPPIS IEFSAGLEAA SGVASGYSGC NRFTGPYEKL VSGMRFGALV STRVACDPAR MQLENDFLEA LKSPLATVGM QPSSAGAQGR QVIWKTAGGA LLQFAEHPLP PRGQPH
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