| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0687 |
|---|
| Symbol | rfbF |
|---|
| ID | 1219492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 735017 |
|---|
| End bp | 735946 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637237046 |
|---|
| Product | dTDP-rhamnosyl transferase rfbf protein |
|---|
| Protein accession | NP_518808 |
|---|
| Protein GI | 17545406 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAAT CAGGTGCAAT TTTCGTCACG TTCCGTCCGA CGGACGAGCA GGTCGCTGCG
ATCGCCGCCA CGGCGCGGCT GTTCGACGCC GTGATCGTGG TCGACAACTC GCCGGCGCCG
GACGCGGCCC TGCGTCACCG CTTCAGTCTG CCGAACGTCC AGTTTCTGGA GAACGCAAAC
CGTGGCGGGA TCGCGGGGGC GTTCAATCGC GGTGTCGAGG CGCTGCTGGC GAGCGGAATC
GACCGGGTCT ACTTCTTCGA CCAGGATTCG GCGGTTCCGG CCGACTATCG CCAGCTCATG
GACGAGGCGC TGGACGGCGC GCCCGAGGCC TGCATGATCG GGCCCAAGAT CTATGACATC
AACCTGCGCG CATTCTCGCC GCGCTACCTG GTGTCACGCT GGACGTATCG CGCGGATCCC
ATCCCCGAGT CGGCCAACGC GCTGATACCG TGCTCGTTCC TGATTTCGAG CGGCTCGGTG
GCCACCCGGG CGGCGTTGAC GGCGTGCGGT CCGTTCCGGG AAGACTATTT CATCGACGAT
GTCGATACAG AGTACTGCCT GCGCGCGGCC CAGCTGGGCG TCGGCGTGTT CATCAACCCG
CGCGCCGTGC TGAACCACGC GATCGGCGAG CGCGAAGAGC ACCGGTTCCT GGGCGTGCGG
ATCCGGCCGA GCCATCATGG CGCATTGCGC AGGTACTACC GTTGCCGGAA CGGCATCAGC
CTCAGCCTGC GGCATGCGCG GCATTCGCCC GCGTTTCTGA TACATAACCA GAAGCGGCTG
GCGCACGAGA TCATCGGTGT GCTGCTCTAT GAGCGGCGGA AGTGGAAGAA ATTGACGGCG
ATCGGGGTCG GCATCATCCA CGGCGTGATG AGCCGGCTGG GCGATCTCCG GGAAATCGCC
CCGCGGTTCC ATCAATGGCT GGTGGGCTGA
|
|---|
| Protein sequence | MLKSGAIFVT FRPTDEQVAA IAATARLFDA VIVVDNSPAP DAALRHRFSL PNVQFLENAN
RGGIAGAFNR GVEALLASGI DRVYFFDQDS AVPADYRQLM DEALDGAPEA CMIGPKIYDI
NLRAFSPRYL VSRWTYRADP IPESANALIP CSFLISSGSV ATRAALTACG PFREDYFIDD
VDTEYCLRAA QLGVGVFINP RAVLNHAIGE REEHRFLGVR IRPSHHGALR RYYRCRNGIS
LSLRHARHSP AFLIHNQKRL AHEIIGVLLY ERRKWKKLTA IGVGIIHGVM SRLGDLREIA
PRFHQWLVG
|
|---|
| |