| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0686 |
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| Symbol | |
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| ID | 1219491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 733710 |
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| End bp | 734978 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637237045 |
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| Product | putative lipopolysaccharide O-SIDE chain biosynthesis transmembrane protein |
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| Protein accession | NP_518807 |
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| Protein GI | 17545405 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.599007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGAA CGCCCATTCA ACGTACCGGT GTCGTCAGGA CGCTCACCAA TTCGAGCGTC
GTCGTGCTCG AGCGGATCGC CCAGATCGGG GTGACGCTGG TCGCGACCCT GGTGATCGCG
CGCACCTTCG GGCCGCAGAC GTATGGCGTC TGGCAGGCCG CGCAGTCGAT CTTCGCGGTG
ACGTCCGCGC TGTGCCTGAT CGTGCCGGGC GAGGTCCTGC TGCCTCGCCT GAAGGCGACG
AGCGATTGGG AGCGGCTGTC CGTCACGCTG TCGTCGGCGC TGGTCGCGCG CATCGCTTTC
GGCGTGCTGA TCCTGGTGGG CTACGGCATC GCCCTGATCG TCGCGCCGGC CGCGCTGCAT
GGCACGCTGG TCGTCGCGCT GATCCTGCAG GGCTCGATCG CCGTCACCGA GCCCGTGAAC
GGGCTGAGTT CGTGGTACCA GGCGCAGTTG AACAATGTGC CCGTGTCGCT GCGCCGCCTG
GTGGGCCTGG CGCTGCGGCT CGGCATTTTT GTGCTGTGCA TCGTGATGCT GGGCAGGCCG
CCGCTGCCGC TGCTGGCGGC GGCCTGGCCG ATCGAAGCGC TGGTCGCCGG CGTGCTCGTG
ACGGCGATGT TCATGGCGTC CCACGGGGCA TTCCGGTTCC GGTGGACCGC CACGGAGTTG
TCGTCGCTGG TGCGCGCGGG GCTGCCGGTC TGGTGGGGGC TGCTGTTCTA CGCCTTGTTC
CTGAAGGCGG ACCGGCTGCT GCTTCCCCAT CGCATGGACC CGCAGGGTTT CGGTGTCTAC
GGGGCCGCGG CCCAACTGGT CGAAACCGCG GTCGGCATGG TGATTCTCGT CACCAACACG
CTGATGCCGA GGCTGATCTA TCACCGCGAG GACGGCCGGC TGGACCGCAC GACCGCGGCG
GGCCTGCTGG GCGCGATCGC GATCGCATGC GCGGTGACGT CGCTGCTGGC ACCGTTCATC
ATCCGCGTGC TGTTCGGTGC GGGTTTCACC GGCGCGGCGC CGATCCTGGC CATCGGCATC
TGGCTGGCTG TCCTGGCAGC GATCGATACG CTGCTGACGG GTATCTTGAT TCGGGAGCGG
GTGTTCCGGG TGGTGCTGAT CAAGTGGACG CTTGCCGCGG CCCTGCAGTA CGCGATCATT
GCCGTGCTGT TTCCGCATCT GGGGCTGGGC GCGGTGCTCA TCGCCTATCT GTCGGGATAT
GGCGTGGCGC TGGGGCTCTC AGGGTATAGC CTGAATAGGT TGCACTCGCG TGCCGAGGCA
CGGGCGTAG
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| Protein sequence | MTGTPIQRTG VVRTLTNSSV VVLERIAQIG VTLVATLVIA RTFGPQTYGV WQAAQSIFAV
TSALCLIVPG EVLLPRLKAT SDWERLSVTL SSALVARIAF GVLILVGYGI ALIVAPAALH
GTLVVALILQ GSIAVTEPVN GLSSWYQAQL NNVPVSLRRL VGLALRLGIF VLCIVMLGRP
PLPLLAAAWP IEALVAGVLV TAMFMASHGA FRFRWTATEL SSLVRAGLPV WWGLLFYALF
LKADRLLLPH RMDPQGFGVY GAAAQLVETA VGMVILVTNT LMPRLIYHRE DGRLDRTTAA
GLLGAIAIAC AVTSLLAPFI IRVLFGAGFT GAAPILAIGI WLAVLAAIDT LLTGILIRER
VFRVVLIKWT LAAALQYAII AVLFPHLGLG AVLIAYLSGY GVALGLSGYS LNRLHSRAEA
RA
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