Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0666 |
Symbol | hemL |
ID | 1219471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 711010 |
End bp | 712311 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637237025 |
Product | glutamate-1-semialdehyde aminotransferase |
Protein accession | NP_518787 |
Protein GI | 17545385 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGCC CGTCCCGTAG TGTCTCCCTG TTTGAACGCG CCCAGAAAAC CATCCCCGGC GGCGTGAATT CGCCGGTGCG GGCGTTCCGC TCGGTCGGCG GCACGCCGCG TTTCATTGCG AAGGCGGCCG GCCCCTACCT GTGGGATGCC GATGGCACCC GCCTCATTGA CTACGTCGGC TCCTGGGGCC CGATGATCGT CGGCCACGCG CACCCCGAGG TGGTGCGCGC CGTCCAGCAG GTCGCGGCCG ACAGCTTTTC GTTCGGCGCG CCCACCGAGG CCGAGGTGGT AATGGCCGAG ACCCTCTGCG AGCTGGTGCC CTCCATCGAG CAGGTCCGGC TGGTGTCGTC CGGAACCGAA GCGACGATGA GCGCCCTGCG CCTAGCACGC GGCTTCACCG GCCGCGACCT CATCGTGAAA TTCGAGGGCT GCTACCACGG ACATGCCGAC AGCCTGCTGG TCAAGGCCGG CTCGGGCCTG CTGACCTTCG CGGATACCAC GCAGAACGCG CCCTCCTCGG CCGGCGTGCC GGAAGATGTG GTCAAGCACA CCATGGTCCT GCCGTACAAC GATGCCGATG CCCTGCGCGA GGCCTTTGCC CGCCACGGCA AGGAGATCGC CGCGGTCATC GTCGAGCCGG TGGCCGGCAA CATGAACCTG GTGCGCGCCA CGGCCGCGTT CCTGCAGGCC ATGCGCGCGC TGTGCACCGA GCACGGCGCC GTGCTGATCT TCGACGAAGT GATGACTGGC TTCCGCGTGG CGCTGGGTTG CGCGCAGGCG CTGTACGGCA TCACCCCGGA CCTGACCTGC CTGGGCAAGG TCATCGGCGG CGGCATGCCG GCGGCGGCCT TCGGCGGCCG GCGTGACATC ATGGGCTTCC TCGCGCCGCT GGGCAGCGTG TACCAGGCCG GCACCCTGTC GGGCAATCCG CTGGCGGTGG CCGCCGGCGT GACCACGCTG CGGCTGATCG CCGCGGACGG CTTCCACGAC CGCCTGGCCG CGCAAACGCG CAAGCTGGTC GACGGGCTGG CCGGGATCGC GCGCGATGCC GGCGTCCCGT TCGCGGCGGA CAGCGTGGGC GGCATGTTCG GCCTCTACTT CCGCGAAGGC GTGCCGACCA GCTTTGCCGA AGTCACGCAG AGCGACGTGG GGCGCTTCAA TGCGTTCTTC CACGCGATGC TGGCCGAAGG GGTCTACCTG GCGCCGTCGG CCTTCGAGGC GGGGTTCGTG TCGTCGATGC ATGATGATGC TGTGCTGGAA GCGACGTTCG AAGCGGCGCG GCGGGCGTTC AAGGCTGTTT GA
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Protein sequence | MSSPSRSVSL FERAQKTIPG GVNSPVRAFR SVGGTPRFIA KAAGPYLWDA DGTRLIDYVG SWGPMIVGHA HPEVVRAVQQ VAADSFSFGA PTEAEVVMAE TLCELVPSIE QVRLVSSGTE ATMSALRLAR GFTGRDLIVK FEGCYHGHAD SLLVKAGSGL LTFADTTQNA PSSAGVPEDV VKHTMVLPYN DADALREAFA RHGKEIAAVI VEPVAGNMNL VRATAAFLQA MRALCTEHGA VLIFDEVMTG FRVALGCAQA LYGITPDLTC LGKVIGGGMP AAAFGGRRDI MGFLAPLGSV YQAGTLSGNP LAVAAGVTTL RLIAADGFHD RLAAQTRKLV DGLAGIARDA GVPFAADSVG GMFGLYFREG VPTSFAEVTQ SDVGRFNAFF HAMLAEGVYL APSAFEAGFV SSMHDDAVLE ATFEAARRAF KAV
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