| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0657 |
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| Symbol | cpaA1 |
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| ID | 1219462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 705023 |
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| End bp | 705541 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637237016 |
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| Product | prepilin peptidase transmembrane protein |
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| Protein accession | NP_518778 |
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| Protein GI | 17545376 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.6385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.502412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAC CGACCGCCCT GGCCAACCTG AGCCTGCTCG TGCTCGTGGT GACCGCCGCC
GTGCATGACG TCCGGACCCG CCGCATTCCC AACCGGCTGG TAGCCGCGGG CCTGGCGGCC
GCCCTCATCG CGCAGTGCGC GATGCTCGGG CCGGTTGCCG GGGCGCTGGC CTGGCTGGGC
GGCGCCGCGG CCGGCATGGG GCTGTGCATC GGCCTCTACC TGCTGCGCGG CATGGGCGCG
GGCGACGTCA AGCTGATGGG CGCGATCGGT GCCTTCACGG GACCGCTGGC TGCCCTGCAT
GTCGGGCTGG CGAGCTGCGT GGCCGGCGGC GTGCTGGCGG TCGCGATGGT TGCCCTCGAC
GCGAGGAAGA ACATGGGGAT GGCGCTGCTG TTCTCGGCAC CGGTGGCCGA CAGGCAGACG
CAGCCCAAGG AAAGTGTGCG CCGCGGCAAC GCGATCCGGC TGCCGTATGC GGTGGCGTTC
GCGGCAGGCA CGCTGCTGGT GAAGTGGGGA GTGCTCTAG
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| Protein sequence | MSTPTALANL SLLVLVVTAA VHDVRTRRIP NRLVAAGLAA ALIAQCAMLG PVAGALAWLG
GAAAGMGLCI GLYLLRGMGA GDVKLMGAIG AFTGPLAALH VGLASCVAGG VLAVAMVALD
ARKNMGMALL FSAPVADRQT QPKESVRRGN AIRLPYAVAF AAGTLLVKWG VL
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