Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0631 |
Symbol | |
ID | 1219436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 678246 |
End bp | 678974 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637236990 |
Product | hypothetical protein |
Protein accession | NP_518752 |
Protein GI | 17545350 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACAA GCGCATCATC AAGCACCGAT CCGCTGTTTC AGATGATCGG CGCGGTTTCT CCGGTTCTCG TGCCTTACAC CCGGCACAGG ATCGTCGAAG AACTCTGGCA CCGCCCAGGG CTCCAGCCGC GCGACCGCGC GATCGTCACG CTTTCCGTGC TGGTTTCCCG AAACGCGTCC AACGCCTATG ACCACTACCT CAACAAGGCG CTCGACAGCG GGCTAAAGCC GAGCGAGCTT TCCGAGTTGC TGACCCACCT GGCGTTCTAT GCGAGCTTTG CGTACTCGTT CGGCGCAGTG GCCGTGCTCA AGGGCATCTT CGAGGCACGC GGCATCACCG TCGATGCGCT TCCCGAGGTT TCTCCCGCTT TGCTTGCGGC AGAAGAGGCG CTGCCAGGCG CGGCAAAACG GACCGCGTTC CTGGAGGCCA ACGTCGCGCC TGCTTCACAG GCCTTGCTGC ACTTCACCGA TGCGCTGCTC AATCACGAGG TCTGGCTGAG GCCGGGCCTG GCGACGCGCG ACCGCGCACT TGCCACGATC GCTTCCCTGG CAGCGCAAGG GCAGGCGGAC GTGTTGCCGA CCTATCTGGA GCGCGCGTTG GCAAGCGGTG TCACCAAGGA AGCAATCGGT GAGCTGCTGG CGCATGTTGC CTTCTATGGC GGATGGGGCA ACGCGATCCA GGCGGCTTCC GCCGTGAGCA GATATTGGAG CGACAGCGCC GCCGGATAA
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Protein sequence | MNTSASSSTD PLFQMIGAVS PVLVPYTRHR IVEELWHRPG LQPRDRAIVT LSVLVSRNAS NAYDHYLNKA LDSGLKPSEL SELLTHLAFY ASFAYSFGAV AVLKGIFEAR GITVDALPEV SPALLAAEEA LPGAAKRTAF LEANVAPASQ ALLHFTDALL NHEVWLRPGL ATRDRALATI ASLAAQGQAD VLPTYLERAL ASGVTKEAIG ELLAHVAFYG GWGNAIQAAS AVSRYWSDSA AG
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