| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0595 |
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| Symbol | |
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| ID | 1219400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 640997 |
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| End bp | 643186 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637236954 |
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| Product | putative outer membrane receptor signal peptide protein |
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| Protein accession | NP_518716 |
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| Protein GI | 17545314 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.426057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCGT TCCAGCCACG CGCGCTGGTG CTGGCGCTCG CCGCCGCCCT GCCATCCCTG
GCCGCCGTTT CCGCATCGGC GCAGGACGCC GCCAACCCCG CTGCCGCAGC GGCGTCCTCC
ACGTCCACGG CGCAAGCCAC CGCCGCCAAC GTGCGGGACC TGGGCGAGAC GCGCGTCACG
GCCAAGCGGC TCGATGCCGC CCGCAACGCG CTGTCGCCGG ATACCGGCAG CTCGGTCTAC
CGCTTCGATA CCGACGACAT CGCCCGCCTG CCGCTGGGCG ATGCCACGCC GCTGAACCAG
GTGCTGCTGC AGGCGCCGGG CGTGGTGCAG GATTCGTTCG GCCAGCTGCA CGTGCGCGGC
GATCACGCCA ACCTGCAGTA CCGCATCAAC GGCGTCATCA TTCCCGAGCC GATCAGCGGG
TTCGGGCAGA TGCTCGACAC GCGCTTCGCC AACCAGATCA ACGTGCTGAC CGGCGCGCTG
CCGGCGCAGT ACGGCTACCG AACCGCCGGC ATCGTCGACA TCCAGACCAA GGGCACCGCC
ACCGATGACG CGGGCGAGCC CAAGGCCATC AGCGGCGAGA TCGGCAGCGT GCTGGGCAGC
AACGCCACGC ACGAGGTCAA CTTGCAGTTG CAGGGCAGCA AGGACCGCTT CAGCTACTAC
CTCTCGGGCG TGTTCGCCGA AAACAATCTC GGCATCGAGA ACCCCACGGG CAACCGCAAC
GCCACGCACG ACCACACCAC GCAGAACAAG TCGTTCGGCA TGCTCTCGTA CCTGCTCGAC
GCGGACAGCC GGGTGAGCTT CATGTTCGGC ACCGCCAACA GCCGCTTCGA GATTCCGACC
CGTCCGGGCC TGGAGCCGCA GTTCACGCTG GGCGGCGTGA CGCCGCCCGC TTCGCAGGCG
CTTAATGCCA ATCAGCGCGA GAAGACCGAC TTCCAGATCC TGACGTACCA GCAAAAGGTG
TCGCCCAAGC TGGACTACCA GGTGTCGGTG TTCCGCCGCG TGAGCCGCAT CGATTATTCG
CCGGACCCGG TCGGCGACCT GGTCTACAAC GGCGTGGCCT CGGACATCTC GCGCCGCAAC
GAAGCCTATG GCGTGCAGGG CGATGCCAGC TACAAGCTGA ACGACCGCCA TACGCTGCGC
GCCGGTCTCT TCGCGCAGCG CGAGCGCTTT GCCGTCGACA ATGCCTCCAC CGTCTTCCCC
GCCGACGACA CCGGCGCGCA GACCAGCACC ACGCCGTTCA CCGTGCTCGA CAACTCGAGC
GGTTCCGGCA CCACCCTCGG CGTCTATCTG CAGGACGAAT GGAAGCCGAC CGACCGGCTC
ACCATCAACT ACGGCGCGCG CTACGACCAC GTCAACGCCA TCGTCAGCGA GCAGCAGCTC
AGCCCGCGCC TGGGCCTGAC CTACGACCTG ACCAGCCGCA CCCGCCTGCA CGCCGGCTAC
GCACGCTACT TCACGCCGCC GCCGACCGAG AAGTTCGATA TCACCACGGT GCAGAAATTC
ATCGGCACCA CGAATGCGCT GCCGTCGGAT GCCAACACGG CCGTGAAGTC CGAGCGCTCG
AATTACTTCG ACCTCGGCAT CTCGCACCAG CTCACGCCGC ACCTGACGCT GGGGCTGGAT
GCGTATTACC GCGACGTGCG CCACCTGCAG GACGAAGGCC AGTTCGGCAA CGCGCTGCTG
TTCTCGGCCT TCAACTACGA ACGCGGCCGC ATCTACGGGC TGGAGGCCAG CGCCAATTAC
CGCGAGGGCA ATTTCGGCGC CTACCTGAAC CTGGGCGTGT CGCGCGCGCA GGGCAAGGGC
ATCGAAACCG GCCAGTTCAA CTTCGACGAC GCGGAGCTGG CCTACATCAA CAGCCACTGG
GTCAGCCTCG ACCACGACCA GCGCCTGACC GCGTCGGCCG GCGTGTCGTA CCAGTACCGG
GGCACCACCT GGCTGGCCGA TGCGCTGTTC GGCTCGGGCC TGCGCAGCGG TTTTGCCAAT
ACCGACCGCT TGCCGGCGTA CTGGCAACTG AACCTCGGCG CCGCGCGCGA TTTCAACCTG
CCGCTGGCGG GCAAGCTCAA GACCCGGCTG ACGGTGCTCA ACGTGCTCGA CCGCAGCTAC
GCGCTGCGCG ACGGCACGGG CATCGGCGTG GGCGCGCCGC AGTTCGCGCC GCGCCGCACC
TTCCTGCTGT CGGTCAGCAA GCCGTTCTGA
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| Protein sequence | MIPFQPRALV LALAAALPSL AAVSASAQDA ANPAAAAASS TSTAQATAAN VRDLGETRVT
AKRLDAARNA LSPDTGSSVY RFDTDDIARL PLGDATPLNQ VLLQAPGVVQ DSFGQLHVRG
DHANLQYRIN GVIIPEPISG FGQMLDTRFA NQINVLTGAL PAQYGYRTAG IVDIQTKGTA
TDDAGEPKAI SGEIGSVLGS NATHEVNLQL QGSKDRFSYY LSGVFAENNL GIENPTGNRN
ATHDHTTQNK SFGMLSYLLD ADSRVSFMFG TANSRFEIPT RPGLEPQFTL GGVTPPASQA
LNANQREKTD FQILTYQQKV SPKLDYQVSV FRRVSRIDYS PDPVGDLVYN GVASDISRRN
EAYGVQGDAS YKLNDRHTLR AGLFAQRERF AVDNASTVFP ADDTGAQTST TPFTVLDNSS
GSGTTLGVYL QDEWKPTDRL TINYGARYDH VNAIVSEQQL SPRLGLTYDL TSRTRLHAGY
ARYFTPPPTE KFDITTVQKF IGTTNALPSD ANTAVKSERS NYFDLGISHQ LTPHLTLGLD
AYYRDVRHLQ DEGQFGNALL FSAFNYERGR IYGLEASANY REGNFGAYLN LGVSRAQGKG
IETGQFNFDD AELAYINSHW VSLDHDQRLT ASAGVSYQYR GTTWLADALF GSGLRSGFAN
TDRLPAYWQL NLGAARDFNL PLAGKLKTRL TVLNVLDRSY ALRDGTGIGV GAPQFAPRRT
FLLSVSKPF
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