| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0559 |
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| Symbol | |
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| ID | 1219364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 603351 |
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| End bp | 605060 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637236918 |
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| Product | hypothetical protein |
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| Protein accession | NP_518680 |
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| Protein GI | 17545278 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.261302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTGTGGC CGGTCTGGCT GGCCACAGTT GCGTGCTGGT CTGTCCCGTT CCTGGTGGCT
GTCCATAGTT ACCCGATCCC AACGTTCTAC AGCGAATTCG TAGCGGCGAT CGGCTGGGTT
GCTCTGGCAG CGGGCGTGCT GGGCTCGACG TGGCATAGCA AGGCAGGGCT ACCCAAGGTT
GTCTTGGCGC CGCTGGCGCT GATCGGTGTG TTGATCGTGC AACTGGTCGT TGCCACGCCG
CTGAACCCGT TTTTTACCTT TGCGGCCATC GTGTTTCTGC TCGGAACCGT GGCCGTATGC
GGTCTCGGTG CGCGCTGCCG CGACGTCCCC GGTGTGCTGG AGTCGATCGC GGTTGCCGTC
ATCATTGGCG GATTGCTGAC GGTGGCGATT GAGTGTCTGC ACCTGTTCCG TGTTTCTGGC
CTGCCGATCA ATTGGATCTC GATCATGCCA ACGGGCGCAG GCCGCCGGAT GTGGGGCAAC
CTGAATCAGC CGAATCACGT GGCGACCTAT CTCGCCTTTG GTCTGGCAGC GTGTCTGTTC
TTGGGTTCGA CGCGTCGGCG ATATTGGGCG CCCCTGGCTG CCATCGCTCT GGCATTGTTG
TTGGGCATGG CGCTGACGGT TTCCCGGATG AGCTGGCTTC ACCTTGTCCT GGTTGGGGGC
GTCGCAGGGC TGGCCTGGTC AGCAGAGGAG CGGGGGGCTC GCCGCTGGAT TCGGGCGGGC
GTGCCTGTGC TCGGCCTGGC CGTGGTTTAT CAGCTCTGCA ACTGGCTGGT GGCCTATGCC
AACGTGCTTT GGCATCTGGA CTTGCCGATC TCGCTGGACG AGCGGTTGCA GCAGGGTGTG
GGTCTGCGGG TGTTCCTATG GAAGCATGCG TGGCACATGT TCCTGGCCCA TCCCTGGCTC
GGCGGCGGCT GGGGCGACTA TGCCTGGAAC CAGTACGTGC AGACCGACGT GCTCGGCCAT
GTCGAAATGT CCATGAACGC CCACAACCTC GTCCTGGATC TCCTGGCCAA GGTGGGTGTG
TTCGGGTTGC TGGCCGTGAT GCTGCCGTTC TTGGGGTTGG TGCATGCTGC GTGGAAACGG
CGAATGACGC CCGCGCTGGC CTTTCTGTAT GCGGTCATTT TGGTGACCGT GGCGCATTCG
ATGCTGGAAT ATCCGCTGCA CTATCTGTAC TTCCTGCTGC CGTTTGCTTT CGCGCTGGGG
TATGTGGATG ACCGCAAGTC GCGCGTTCTT TCCCCAGACA CGGCATGGGT ACTGACCGGC
ATCGTGGCAA TATGCGGTGC CGTGCTGACG GGCCGGATGT GGATCGACTA CCAATCGGTG
GAGCGCTTGT ATTACTCCCT CGACGGTCCG GTGGAATTGC AACGGTACCA GCGCAGTGGG
CAACTGCTGC TGGTCCCATA TGGCAACCTG TCAATCGCGA ACAATGCCGG GATGACGGCC
GAGACGGCGC CGATCATGGC TGCGGTCGAA CACCAGGCTG TGCAGTTCTA TCCTGGTTCT
GGCACGGTTC AACGTTGGGC GATTGCGCTC GCGTTTCAAG GCAAGACCGA CGAAGCCCTC
ACCCAGGTTC GTCGGCTGCA CAATCAATAC TGGATCGACT ATGCGGGCGA TTCGAAATTG
CTGACACTCG TCTGCACCAA GAAATTGGAA GGGTTGGCTA CGTTCTGCGC GCGGCTCAAG
GCGGAGAACT TGGTTGTCGG TGTAGATTGA
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| Protein sequence | MLWPVWLATV ACWSVPFLVA VHSYPIPTFY SEFVAAIGWV ALAAGVLGST WHSKAGLPKV
VLAPLALIGV LIVQLVVATP LNPFFTFAAI VFLLGTVAVC GLGARCRDVP GVLESIAVAV
IIGGLLTVAI ECLHLFRVSG LPINWISIMP TGAGRRMWGN LNQPNHVATY LAFGLAACLF
LGSTRRRYWA PLAAIALALL LGMALTVSRM SWLHLVLVGG VAGLAWSAEE RGARRWIRAG
VPVLGLAVVY QLCNWLVAYA NVLWHLDLPI SLDERLQQGV GLRVFLWKHA WHMFLAHPWL
GGGWGDYAWN QYVQTDVLGH VEMSMNAHNL VLDLLAKVGV FGLLAVMLPF LGLVHAAWKR
RMTPALAFLY AVILVTVAHS MLEYPLHYLY FLLPFAFALG YVDDRKSRVL SPDTAWVLTG
IVAICGAVLT GRMWIDYQSV ERLYYSLDGP VELQRYQRSG QLLLVPYGNL SIANNAGMTA
ETAPIMAAVE HQAVQFYPGS GTVQRWAIAL AFQGKTDEAL TQVRRLHNQY WIDYAGDSKL
LTLVCTKKLE GLATFCARLK AENLVVGVD
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