| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0528 |
|---|
| Symbol | |
|---|
| ID | 1219332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 566799 |
|---|
| End bp | 567695 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637236886 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_518649 |
|---|
| Protein GI | 17545247 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4535] Putative Mg2+ and Co2+ transporter CorC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0687971 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0248188 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGATC CGTATCCCAG TCCGAAGCCA GCCGACAAAC CCCGCTCGCT GCTGGAACGC
CTGACCGATC TCATCTCGCC CGAGCCCGAG TCGCGGGCCG AGCTGCTGGA AATCCTCCAA
GACGCGCACG CGCGCAACCT GATCGATGCC GACTCCCTGT CGATGATCGA AGGGGTCTTC
CAGGTCTCCG ACCTGTGCGC GCGCGACATC ATGATCCCCC GCGCGCAGAT GGACGCGATC
AACATCGCCG ACGCGCCCGC CGAATTCATC CCCTTCGTCC AGCAGGCCGC GCATTCGCGC
TTCCCCGTCT ACGAGGGCAG CCGCGACAAC ATCATCGGCA TCCTGCTGGC CAAGGACCTG
CTGCGCTACT ACACGGACGA AGGCTTCGAC GTGCGCGACA TGCTGCGCCC GGCCGTGTTC
ATTCCCGAAT CCAAGCGGCT GAACGTGCTG CTGCGCGACT TCCGCGTCAA CCGCAACCAC
ATCGCCATCG TCGTCGATGA ATACGGCGGC GTGGCCGGCC TGATCACCAT CGAAGACGTG
CTGGAGCAGA TCGTCGGCGA CATCGAGGAC GAATACGATT TCGACCAGGA GGAAGACAAC
ATCCTCCCCA CCGCCGACGG CCACATGCGC GTGCGCGGGC TGACCGAGAT CAGCCAGTTC
AACGAAGCCT TCGGCACGCA CTTCTCCGAC GAGGACGTCG ACACCGTCGG CGGCCTGCTC
GCCAACCACC TGGGCCGCGT GCCGCACCGG GGCGAGAAGA TCGTGCTGGG CACGCTGCAG
TTCGACGTGC TGCGCGCCGA TGCGCGCCAG GTGCAGGTGC TGCTGGTGCG CCACCTCGCC
GCACCCGCGC CGGGCGCCGC CGCCCCGGCC GACCCGTCCC GCTCCAACCC CGCCTGA
|
|---|
| Protein sequence | MNDPYPSPKP ADKPRSLLER LTDLISPEPE SRAELLEILQ DAHARNLIDA DSLSMIEGVF
QVSDLCARDI MIPRAQMDAI NIADAPAEFI PFVQQAAHSR FPVYEGSRDN IIGILLAKDL
LRYYTDEGFD VRDMLRPAVF IPESKRLNVL LRDFRVNRNH IAIVVDEYGG VAGLITIEDV
LEQIVGDIED EYDFDQEEDN ILPTADGHMR VRGLTEISQF NEAFGTHFSD EDVDTVGGLL
ANHLGRVPHR GEKIVLGTLQ FDVLRADARQ VQVLLVRHLA APAPGAAAPA DPSRSNPA
|
|---|
| |