Gene RSc0450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0450 
Symbol 
ID1219254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp478618 
End bp479541 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content67% 
IMG OID637236808 
Productputative ATP-sensitive inward rectifier potassium channel related transmembrane protein 
Protein accessionNP_518571 
Protein GI17545169 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCC GGTCGTTCCT TTCCCGGCGC ACGCGCCGCG GGCGCAAGCT CTGGTCCGGC 
ACCCAGCACG TGATTGCCCA CGGCATGCCG CCGCTCGGCT GGCGCGACAT CTACCACCGC
GCGCTGGAGG TGAACTGGCC GACGTTCTTC GCGCTGCTCG CCGGGCTGTT CTTCATGCTG
AACACCGTCT TCGCCGGGCT GTATTCGCTC GGCACGGCGT CCATCGCCAA CCAGTCGCCG
CCGGGCTTCG TCGGGGCGTT CTTCTTCAGC GTGGAGACGC TCGCCACCGT CGGCTACGGC
GACATGCACC CGCAGACCCT CTACGCGCAC TGCATCGCCA CGCTGGAGAT CTTCGTCGGC
ATGTCGGGCA TCGCCCTGGC CACGGGGCTG GTGTTCGCGC GCTTCTCGCG GCCGCGCGCC
AAGATCATGT TCGTGCGCAA TCCGATCGTG CGCACGCTCA ACGGCAAGCC GACGCTGATG
GTGCGTGCCG CCAACGCACG CCAGAACGTG ATCGCCGAGG CCACGGCCAA GCTGCGCCTG
CTGCAGGACG AACGCTCGCC CGAGGGCTAC ACGCTCTACA AGATTCGCGA TCTCACGCTG
GTGCGCAGCG AGCATCCGAT CTTCCTGCTC GGCTGGATCC TGATGCACGT GATCGACGAG
ACGAGTCCGC TCTTCGGCGC TACCGCCGCG TCGCTCGCCG CCGGCGATGC CTTGCTGCTG
CTCACCATCG GGGGCTCCGA CGAGACCGCC GCCCAGACCT TGCTGGCACG CCATTCCTGG
CGGCACGACG AGATTCGCTG GGGGCATCGC TATGTCGACC TGATGCACGA CGAAGGCAAC
GTCACGCATG TCGACTACGC GAACTTTCAC GAGACCGTGC CGGTGGACGA GCCGGCCGCT
GGCGCATCAT CCGACCAGGC TTGA
 
Protein sequence
MDIRSFLSRR TRRGRKLWSG TQHVIAHGMP PLGWRDIYHR ALEVNWPTFF ALLAGLFFML 
NTVFAGLYSL GTASIANQSP PGFVGAFFFS VETLATVGYG DMHPQTLYAH CIATLEIFVG
MSGIALATGL VFARFSRPRA KIMFVRNPIV RTLNGKPTLM VRAANARQNV IAEATAKLRL
LQDERSPEGY TLYKIRDLTL VRSEHPIFLL GWILMHVIDE TSPLFGATAA SLAAGDALLL
LTIGGSDETA AQTLLARHSW RHDEIRWGHR YVDLMHDEGN VTHVDYANFH ETVPVDEPAA
GASSDQA