| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0398 |
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| Symbol | |
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| ID | 1219202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 424696 |
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| End bp | 426624 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637236756 |
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| Product | hypothetical protein |
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| Protein accession | NP_518519 |
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| Protein GI | 17545117 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000413464 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCATGC CGCACGCCTT CTCCCGCCAG CCCGCGACGC ACCGTTCCGG GCGCTTTCCG
CGCAGCCGGG CGCTCCTGCT GGCCTCGCTG CTTGCGGCGG GATTGGCGAG CCTGCCGGCG
TGGGCCGCGG CACCGGCCAC GCGGACGGCA CAGGCGGCGC CTGAAGGCAG CAGCCGGGCA
GCGGTCCAGC TCGAAAAATC CCGGCCGCGC GGCAACCTGC TGGCGACCGA CCGCACCGAC
CTGCCGGCCG TCCCGCTCTC CGAAGACATC ATGTACCGCG TGCTGGCGTC CGAGGTGTCG
CTGCAACGCG GCCTGGTCGA GCCGGCCTAC CGCACCTACC TCGGCCTCGC GCAGGACACG
CGCGACCCGC GCTTCGCCCA GCGCGCCACC GAGATCGCCT TCCTGACCCG CTCCCCCTCG
CAGGCGCTGA CGGCCGCGCG GCTGTGGGTC GAGCTCGCCC CCACCTCGAT GCCGGCGCGC
CAGGTGCAGC AGCTGCTGAT GGTCGCCACG GGCCAGTGGA GCGAAGTCGA GCCGATGCTA
CAGGCACAGT TGAACAAGGT CTCGCCCGGA CAGCGCGCCG AGGCCATCCT GCAACTGCAG
CAGCAGATGT CCAAGAGCAA TGACCCGGCC GGCGCCGTTT CCGCCCTGCA ACGCCTGACC
ACGCACGACG CGCAGCGACC GGAAACCCAC CTGGCGCTGG CCCGCGCCAA GGTGGTCGCC
AAGGACAACA CCGGCGCGCT GTCCGAGCTC GACACCGCGC TCAAGCTGCG CCCCGGCTAT
GAAGATGCCG CCATCCTGGC CGCCGAACTG CGCGCAGACA GCGATCCCGA CGCCGCCATC
AGCGGCCTGC GTACGTTCCT GAAGGCGGCG CCGGCTTCCA TCGACGGGCA CCTCGCGCTG
GCCCGCATGT ATCTGGTCCG CAATCAGAAT GACCAGGCGC GCGCCGAATT CGAAGCGCTC
AGGAAAATCG CCCCGACCGA CCCGCGCATC CCGCTGGCGC TGGGCCTGCT GAACCTGCAA
CAGCGGCAGT ACGACTCGGC CGAACAGTAT CTGAAGGAAT ACGTCGCGCA GGCCGCCAAG
TCGCCCTCGC TGAGCCCCGA GCCCGGCTAC CAGGGCCTGG CGCAAGTGGC CGAGGAAAAA
CGCGACTACG CCGGCGCCAT CACGTGGCTG GACAAGATCG CCGGCGCCTC GAACGGCGAT
GGCGACGGCC AGGTGGCGCT TGCCGCCGGC ATCAAGCGCG CCCAGTTGCT CGGCAAGCTG
CGTCGCATCG ATGAAGCGCA GCAGGCCTTC GACGAGCTCA TCGCCGACAC CGAAGACGTG
CCCGACGGCC CGCGCCGGCA AGCCCTGATG GACGGCATCC GCCAGGCCGA GGTCGGCATG
CTGATGGACG CCAAGGCGTA CGGACGCGCA CGTGCCCGCG TCAACGACCT CCTGAGGACC
AGCCCCGACA GCGTCGAATA CACCTATCAG CTGTCGATGC TCGAAGAGCA CGACGGCCAT
TACGACAACA TGGAGACCCT GCTGCGCAAG GTGATCGACC TGCGCCCGGG CCAGGCGATC
GGCTACAACG CGCTCGGCTA CTCGCTGGCC GATCGCAACA TCCGCCTGCA GGAAGCGCAG
GAACTGCTGG AAAAAGCCGT ATCGCTGGCG CCGGACGACC CCTACATCGC CGACAGCCTG
GGCTGGGTCA AGTACCGCCG CGGCGACCTG CCGGCCGCCA CCGACATCCT GCGCAAAGCC
TGGGCCGCCG CGCCGCAGGC CGAGATCGGC GCTCACCTGG GCGAAGTGCT GTGGCAGTCG
GGCAAGCAGG ACGATGCCCG CAAGGTCTGG ACCGAAGCCG CCAAGCTCGA TATCAACGAC
ACGACCCTGC GCGAGACACT GCACCGCTTC AGCCAGCCGC TGCCGGACGC GCCCACGAGC
GCGAACTGA
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| Protein sequence | MTMPHAFSRQ PATHRSGRFP RSRALLLASL LAAGLASLPA WAAAPATRTA QAAPEGSSRA
AVQLEKSRPR GNLLATDRTD LPAVPLSEDI MYRVLASEVS LQRGLVEPAY RTYLGLAQDT
RDPRFAQRAT EIAFLTRSPS QALTAARLWV ELAPTSMPAR QVQQLLMVAT GQWSEVEPML
QAQLNKVSPG QRAEAILQLQ QQMSKSNDPA GAVSALQRLT THDAQRPETH LALARAKVVA
KDNTGALSEL DTALKLRPGY EDAAILAAEL RADSDPDAAI SGLRTFLKAA PASIDGHLAL
ARMYLVRNQN DQARAEFEAL RKIAPTDPRI PLALGLLNLQ QRQYDSAEQY LKEYVAQAAK
SPSLSPEPGY QGLAQVAEEK RDYAGAITWL DKIAGASNGD GDGQVALAAG IKRAQLLGKL
RRIDEAQQAF DELIADTEDV PDGPRRQALM DGIRQAEVGM LMDAKAYGRA RARVNDLLRT
SPDSVEYTYQ LSMLEEHDGH YDNMETLLRK VIDLRPGQAI GYNALGYSLA DRNIRLQEAQ
ELLEKAVSLA PDDPYIADSL GWVKYRRGDL PAATDILRKA WAAAPQAEIG AHLGEVLWQS
GKQDDARKVW TEAAKLDIND TTLRETLHRF SQPLPDAPTS AN
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