| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0319 |
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| Symbol | plcN |
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| ID | 1219122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 349719 |
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| End bp | 351821 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637236676 |
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| Product | non-hemolytic phospholipase C signal peptide protein |
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| Protein accession | NP_518440 |
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| Protein GI | 17545038 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCAA ACAGCCGCCG TGGTTTTCTC CGTTCCGCTG CCCAGTTGGC TGGCGCCGCC
GCCGCGATGG GCGCGATGCC CGCCGGTATC CGGCAGGCGC TCGCGATTCC GGCCTACAAC
GCCCGCCGCA GCATTGAAGA CGTCCAGCAC ATCGTGATCC TGATGCAGGA AAACCGCGCG
TTCGACCACT ACTTCGGCAC GCTGCGCGGC GTGCGCGGGT ATGGCGACAC GCGCACCATC
ACGCTGCCCT CGGGCAAGCC GGTCTGGCAC CAGCCGCTGG CCGGCGGCGT GGGCGAAGTC
CTGCCGTTCC GCCCGGGTGC GCCGGACCTC GGCCTGCAGT TCCTGCAAGA CCTGCCGCAC
GGCTGGAACG ACACGCACGC CGCCGTCAAC GGCGGCCGCT ACGACGGCTG GGTGCCACAC
AAGGGCACCA CCACCATGGC CTACCTGACG CGCCAGGACA TCCCGTTCCA CTACGCGCTG
GCCGACGCCT TCACCCTTTG CGACGCCTAC CATTGCTCGA CGCCGACCTC GACCGATCCC
AACCGCTACT ACATGTGGAC CGGCTACGTC GGCAACGACG GCGCGGGCGG CGGGCCGGTC
ATCGACAATG CCGAGCTGGG CTACGGCTGG TCCACCTATC CCGAGGTGCT GGAGCGCGCC
GGCATCTCGT GGAAGATCTA CCAGGACGTC GGCACCGGCC TCGACGCCAA TGGCGCGTGG
GGCTGGACCA GCGATGCCTA CATCGGCAAC TACGGCGACA ACTCGCTGCT CTACTTCAAG
CAGTACCAGA ACGCGCAACC GGGCAACCCG CTGTACGACA AGGCGCGCAC CGGCACCAAC
GTGTCGGCCG GCGACGGCTA CTTCGACATC CTCAAGCGCG ACGTGCAGAA CGGCGCGCTG
CCGCAGGTGT CGTGGATCGC CGCGCCCGAG GCCTTCTCCG AGCATCCGAA CTGGCCGGCC
AACTACGGCG CGTGGTACAT CGACCAGGTC CTGCAGATCC TCACGTCCAA CCCCGAGGTG
TGGAGCAAGA CGGTGCTGCT GGTCACCTAC GACGAGAACG ACGGCTTCTT CGACCATCTC
GTTCCGCCGT TTGCCGCGTC GGGCGGCAAC GGCCTGTCGA CGGTCGATAC CGGCGGTGAA
TCGTTCCCCG GCAGCAGCCA GTACGTGCCG GGCAGCTATG GCCTGGGTCA GCGCGTGCCG
ATGCTGGTGG TCTCGCCGTG GTCGAAGGGC GGCTGGGTGT GCTCGCAGAC CTTCGACCAC
ACCTCGATCA TCCGCTTCAT CGAGCAGCGC TTTGCCCGCA CGCACGACGT GGTCTCACCG
AACATCTCGA AGTGGCGGCG CACGGTGTGC GGCGATCTCA CCGCCGCGTT CAACTTCGCC
GACCCGAACG GCGCGGTGCC CGCGCTGCCG GGCACGTCCG CGTATGCGCC CGGGGACCGC
CAGCGCCATC CCGACTACAT CCCGCTGCCG CCGCTGGTGC AGTCGGTGCC GAAGCAGGAA
GCCGGCGTGC GCCCGGCACG CGCACTGCCG TACGAACTGT TCGTGCGCGG CCGCCATGAC
GAAGCCGCCG GCCGGTTCCA GATCGACTTC GTCAACACCG GCGAGGCCGG CGCAGCCTTC
CTCGTCTACG TGGCCGGCAG CCCGGATGCG CCGCGCAGCT ACACGGTCGA GGCCGGCAAG
CGCCTGTCCG ACAAGCTGCC GGTCAATGCC GGCGGCACGT ACGATTTCAC CGTGCACGGG
CCGAACGGCT TCCTGCGCCG CTTTGTCGGC AAGCTGTCGC TGTCCGGCCT GCTGCATCCG
CATGGCCAAG CGCTGGAGGT CAAAGAAAGC TACGACGTCG CCAACGGCAA CCTGGAACTG
CGCCTGATCA ACCACGGGCG CGCGCCGAGC ACCGTCACCC TCAAGAGCGC TTACACGGGG
GCCGCGGTGC AGCGCGTAGT GCGCGGCGGC GACGATGCAT CGGTGTACCT GGACCTGCGC
GGCGAGCACG GCTGGTATGA CCTGACCGTC ACCGCCAGCA CCGATGCCGG CTTCCGGCGC
CGCCTGGCCG GACACGTCGA GACCGGCCGC GCCAGTATGT CGGACCCCGC ACTCGGTGCG
TGA
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| Protein sequence | MTSNSRRGFL RSAAQLAGAA AAMGAMPAGI RQALAIPAYN ARRSIEDVQH IVILMQENRA
FDHYFGTLRG VRGYGDTRTI TLPSGKPVWH QPLAGGVGEV LPFRPGAPDL GLQFLQDLPH
GWNDTHAAVN GGRYDGWVPH KGTTTMAYLT RQDIPFHYAL ADAFTLCDAY HCSTPTSTDP
NRYYMWTGYV GNDGAGGGPV IDNAELGYGW STYPEVLERA GISWKIYQDV GTGLDANGAW
GWTSDAYIGN YGDNSLLYFK QYQNAQPGNP LYDKARTGTN VSAGDGYFDI LKRDVQNGAL
PQVSWIAAPE AFSEHPNWPA NYGAWYIDQV LQILTSNPEV WSKTVLLVTY DENDGFFDHL
VPPFAASGGN GLSTVDTGGE SFPGSSQYVP GSYGLGQRVP MLVVSPWSKG GWVCSQTFDH
TSIIRFIEQR FARTHDVVSP NISKWRRTVC GDLTAAFNFA DPNGAVPALP GTSAYAPGDR
QRHPDYIPLP PLVQSVPKQE AGVRPARALP YELFVRGRHD EAAGRFQIDF VNTGEAGAAF
LVYVAGSPDA PRSYTVEAGK RLSDKLPVNA GGTYDFTVHG PNGFLRRFVG KLSLSGLLHP
HGQALEVKES YDVANGNLEL RLINHGRAPS TVTLKSAYTG AAVQRVVRGG DDASVYLDLR
GEHGWYDLTV TASTDAGFRR RLAGHVETGR ASMSDPALGA
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