| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0286 |
|---|
| Symbol | |
|---|
| ID | 1219089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 318346 |
|---|
| End bp | 319062 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637236643 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_518407 |
|---|
| Protein GI | 17545005 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG3087] Cell division protein |
|---|
| TIGRFAM ID | [TIGR02223] cell division protein FtsN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.407695 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCA ATACGCAATC TTCCCGTGCC CGCTCGCAGC GGGGCGGCAC GTTCCTGGGC
CTGGTGCTCG GCCTGATCGT CGGGCTGGCG ATCGCCGTGG TGGTGGCGGT ATACATCACC
AAGGCGCCGG TGCCGTTCGT CTCGCGCAAC GGTGCGCAAC CCAAGCCGAG CGAGCCGGGC
AGCGTGGTCA ACCCGCTGCC GGCCCCGGTC CAGCCGGCCC CGCAGGCGAG CGCCCCGCCG
GCCGACCCGA ACGCTCCGCT GTGGAGCCGC GTGCCGGCCA AGCCGGTCGA CCAGGTGCCC
GAGCCGAACC AGCCGGGCAC CCAGCCGGGC ACCCAGCCGG CCTCCCAGGC CACGCCCAAG
CCGGCCGAGC CGGGCAGCAG CGTCGCGATG CAGCGCCCGC CCAAACCGGT CACCCCCGCG
CCGGCCGAGA AGCCGGTGGC CGACCCGATC GCCGAGATTG CCCGCCAGGA TGCGGCCAAG
ACCGGCTACT TCCTGCAAGT GGGCGCTTAC GATTCCGCCG AATACGCCGA GCGCCAGAAA
GGCAACCTCG CCATGCAGGG CTTCGAGGCC AAGGTCACGC AGCGCGAGGT GAACGGCAGC
ACCAAATACC GCGTCCGCCT GGGGCCGTTC AATTCGCTGG ACGAGATGAC AGCCGTGCGC
TCGCGCCTGC AGGCCAGCGG TGTCGAATCC ACGGTGATCC GCTTCGCACG GCAATGA
|
|---|
| Protein sequence | MARNTQSSRA RSQRGGTFLG LVLGLIVGLA IAVVVAVYIT KAPVPFVSRN GAQPKPSEPG
SVVNPLPAPV QPAPQASAPP ADPNAPLWSR VPAKPVDQVP EPNQPGTQPG TQPASQATPK
PAEPGSSVAM QRPPKPVTPA PAEKPVADPI AEIARQDAAK TGYFLQVGAY DSAEYAERQK
GNLAMQGFEA KVTQREVNGS TKYRVRLGPF NSLDEMTAVR SRLQASGVES TVIRFARQ
|
|---|
| |