Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0283 |
Symbol | |
ID | 1219086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 315826 |
End bp | 316671 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637236640 |
Product | hypothetical protein |
Protein accession | NP_518404 |
Protein GI | 17545002 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.915903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTCA CCGACGCGCT CGGACAGGCG CACGCCCCCG TCGACACCAC GCCGCGCATC GCCAGCCTGG TGCCGTCCAT CACCGACCTG CTGTTCTCGC TGGACCTGGG CGGGCAGCTC GTCGCGCGCA CCGGCTTCTG CATCCACCCG CGCGAGGCGG TGCGGGCCAT TCCCAAGGTC GGCGGCACCA AGACGGTCAA GCTCGACCGG CTGCGCGAGC TGGCGCCCAC GCACGTCATC GTCAACATCG ACGAGAACAC GCGCGAGACA GCCGACAAGC TGCGCGAGTT CGTCCCCCAT GTCATCGTCA CGCACCCGTG CGCGCCGGAG GACAACCTGA CGCTATACGG CTTGCTGGGC GGCATCTTCC GGCGCGAGGC CCAGGCGCAG CGGCTGTCCG AGGCGCTCGC GCGCGAGCTG GCGGCCCTGC GCGGCCAGGT GTTCCCGCTG CGCCGGGTGC TGTACGCGAT CTGGCAGGAC CCGTGGATGA CCGTCGCGCG TGACACCTAT ATCTCGCGCA TGCTGGCGCT GATCGGCTGC CAGACCTGGC CCGAAGACCC GGCGCCGGTG CAATGCGGCA CGGGCAGGCA CGGCGACTGC GCCCGCCCCA ACCGGCCCGA TACGCGCTAT CCCACGTTCC GCTGGAGCGA CGAGGTGGTG CGCAACATCG ACTGCGTGCT GCTGTCCACC GAGCCCTACA GCTTCACCGA GGCCCATGCG GACGCGCTGG AGAAGCAGAT CGGCAAGCCG GTCTACCTCG TGGATGGCGA GATGGTGTCG TGGTACGGCA GCCGGGCGAT CGAAGGGGTG CGCTACCTGG GGCGGCTGGC GCAGGCGTTG ACCTGA
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Protein sequence | MTFTDALGQA HAPVDTTPRI ASLVPSITDL LFSLDLGGQL VARTGFCIHP REAVRAIPKV GGTKTVKLDR LRELAPTHVI VNIDENTRET ADKLREFVPH VIVTHPCAPE DNLTLYGLLG GIFRREAQAQ RLSEALAREL AALRGQVFPL RRVLYAIWQD PWMTVARDTY ISRMLALIGC QTWPEDPAPV QCGTGRHGDC ARPNRPDTRY PTFRWSDEVV RNIDCVLLST EPYSFTEAHA DALEKQIGKP VYLVDGEMVS WYGSRAIEGV RYLGRLAQAL T
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