Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0206 |
Symbol | |
ID | 1219009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 229010 |
End bp | 230038 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637236563 |
Product | putative signal peptide protein |
Protein accession | NP_518327 |
Protein GI | 17544925 |
COG category | [R] General function prediction only |
COG ID | [COG1073] Hydrolases of the alpha/beta superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.990614 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACAC TCTTCGTTTT GCTGGGACTG CTGATCAGTT CATTCACCGC AATGGGAGCA GACATGTCCA ATGGTGCAGA CAACTTTTAC AAGAGCAGCA AGGTGACCGC GCGGAAGGTC ACCTTCAAGA ATCAATACCA AATGACTGTC GCGGGGAATC TCTTCATTCC CAACGGCTTG AATGCGAACG CCAGGACTCC CGCCATCATC GTTGGGCATC CCATGGGCGC GGTGAAAGAG CAGAGCTCGA ACCTGTATGC CCAGAAGCTG GCCGAGCAGG GTTTCGTCAC GCTGTCGCTG GATCTGTCGT TCTGGGGGGA GAGTGAGGGC CGGCCACGCA ATGCCGTGTC GCCAGACATC TATGCCGAGG ACTTCAGCGC CGCGGTGGAT TTTCTCGGCA CCCGGCCGTT CGTTGACCGC GAGCGGATCG GCGTTCTCGG CATCTGCGGC AGCGGCAGCT TCGTCATCAG CGCAGCGAAG ATCGATCCGC GCATGAAAGC CATCGCGACG GTCAGCATGT ACGACATGGG CGCTGCCAAC CGCAATGCGC TTCACCATTC CCTGCCCCTC GAGCAGCGCA AGGCGATCAT TGCGCAGGCC GCCGCGCAAC GTTATGTGGA GTTCACGGGC GGTGAGACGC AATACACCAG CGGCACAGTG CATGAACTGA CCGCAGATAC CGACCCGATC CAACGCGAGT TTTTTGACTT CTACCGTACG CCGCGCGGCG AATACACCCC CAAGGGCTCG TCGCCGAAGC AGACTACGCA CCCGACGTTG ACCAGCAACG TGAAGTTCAT GAACTTCTAC CCGTTCAATG ACATCGAGAC GATTTCTCCG CGTCCCGTGT TGTTCATCAC GGGCGATCAG GCTCACTCCA AGGAGTTCAG CGAAGAGGCA TACCGCCTGG CCGCCGAACC CAAGGAACTA TTCATTGTTC GTGGCGCGGG TCACGTGGAT CTGTACGACC GCGTCAGCCT GATTCCCTTC GACAAGCTGA CCGCGTTCTT TCGGGCCAAC CTGAGATAA
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Protein sequence | MKTLFVLLGL LISSFTAMGA DMSNGADNFY KSSKVTARKV TFKNQYQMTV AGNLFIPNGL NANARTPAII VGHPMGAVKE QSSNLYAQKL AEQGFVTLSL DLSFWGESEG RPRNAVSPDI YAEDFSAAVD FLGTRPFVDR ERIGVLGICG SGSFVISAAK IDPRMKAIAT VSMYDMGAAN RNALHHSLPL EQRKAIIAQA AAQRYVEFTG GETQYTSGTV HELTADTDPI QREFFDFYRT PRGEYTPKGS SPKQTTHPTL TSNVKFMNFY PFNDIETISP RPVLFITGDQ AHSKEFSEEA YRLAAEPKEL FIVRGAGHVD LYDRVSLIPF DKLTAFFRAN LR
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