Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0200 |
Symbol | |
ID | 1219003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 222807 |
End bp | 223229 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637236557 |
Product | putative small HEAT shock protein |
Protein accession | NP_518321 |
Protein GI | 17544919 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.32202 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAC TCAGGCGTTA CGATCCGTTC GCCATCGAAC CGGCGGGCGA TATCTTTCAA GGGCTCTTGC GCTCGTTCCG CGGCGGTATG GATAGCGCAC TGCCGTTCAA GGTCGACGTG ACGGAGTCCG ACACGGCATA CAGCGTCGTC GCAGAAATCC CGGGTGCGAA GAAGGAAGAC ATCGACGTGA CCGTTGATCG CGGCACCGTG ATGATCTCGG CCAAGGTGGA GCGCCAGTCC GAGAAGAAGG AGGGCGAGCG CGTCATCCGC AGCGAGCGCT ACAGTGGATC GATGCAGCGC ATGTTTACGC TGGAGGCAGG CGTTGACGAA AACAAGGTGG AAGCGACTTA CGAGAGCGGG CTGCTGCGCG TGACACTGCC CAAGAAGGAA GTCTCGCCGC AGCAACGCAT CACCATTCGC TGA
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Protein sequence | MSQLRRYDPF AIEPAGDIFQ GLLRSFRGGM DSALPFKVDV TESDTAYSVV AEIPGAKKED IDVTVDRGTV MISAKVERQS EKKEGERVIR SERYSGSMQR MFTLEAGVDE NKVEATYESG LLRVTLPKKE VSPQQRITIR
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