| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0198 |
|---|
| Symbol | |
|---|
| ID | 1219001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 220374 |
|---|
| End bp | 221015 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637236555 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_518319 |
|---|
| Protein GI | 17544917 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.299647 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAATC TGCTCGGTTT GTTCGGTACG GTCTTCGTAC TGAATGTGAT ACCAGCGTTC
GCCCCGCCGA CCTGGATGGT CATGTCGTGG ATCGGCTTTA CGCAACCTGA CGCCAATCCA
GCGCTTCTTG CAGGGATTGC GGCTTGCGCC TCGACCGCCG GTCGCCTGGT CTTAGCCCGA
CTTTCCTGCA CGCTCGTGCG CAACCGCTGG ATGCGCGATG CGGATCGCCA GAACATCGAC
GTCATCAGGA CCTGGATGGA GGGTCGCAAG AGCATGACTG TAGGGCTGGT ACTCGCGTAC
GCATTCAGCC CATTTCCCTC CAACTACGTC TTCATTGCTT ATGGCCTGAC AGGCATGCGA
CTGTGGCTGA TCGGAGTGCC ATTCTTCGTC GGCCGCTGGG TGAGCTATCT GACTTGGACA
AACATCGCCC AGATTAGCGC GCGCTATCTG GACGAGGAAT CGGAGATCAA CGGCGCCTAT
ATGAGCATCT ATTTCGTTCT GTCGCAGTTG ATGTTTCTGG CCCTCGTGTA TGGATTCGCA
AAAGTGGACT GGCACAACAT CATACAAACG AAACGCCTGC GTTGGCGACG CCGGGAGCCG
GCTGCACCAT CCTCCGAAGA CCCACGGGCG ACGCGAGATT GA
|
|---|
| Protein sequence | MVNLLGLFGT VFVLNVIPAF APPTWMVMSW IGFTQPDANP ALLAGIAACA STAGRLVLAR
LSCTLVRNRW MRDADRQNID VIRTWMEGRK SMTVGLVLAY AFSPFPSNYV FIAYGLTGMR
LWLIGVPFFV GRWVSYLTWT NIAQISARYL DEESEINGAY MSIYFVLSQL MFLALVYGFA
KVDWHNIIQT KRLRWRRREP AAPSSEDPRA TRD
|
|---|
| |