| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0197 |
|---|
| Symbol | |
|---|
| ID | 1219000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 219719 |
|---|
| End bp | 220339 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637236554 |
|---|
| Product | putative cytochrome C signal peptide protein |
|---|
| Protein accession | NP_518318 |
|---|
| Protein GI | 17544916 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2863] Cytochrome c553 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.283033 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGAT TCCATCAACC CAGGCGGGTC TGGCTCGCCG GCCTGGTCAC CCTGGCGACA
ATCGGCTGGT CGGTCACAGT CGGTGCGCAG GACGGCGAAA AGCTGGCCGC GCAGCTATGT
GCGTCCTGCC ATGGCGTGCA CGGCAAAAGC GAGTCGCCCA TGTTCCCGCG CCTGGACGCA
CAGATGCCGC ATTACCTGGA GGCGCAGTTG AAGGGCTTCC GAGATCGTGG TCGCGGCGAG
ACCGATGCGC AGGCCTTCAT GTGGGGCATA GCCTCACAGC TCGACGACGT GACCATCGCA
TCGCTGGCTG AGTACTACGC GCGCCAGACC GCACCTGCTG GCGCCGCGGG TGATCCGGCG
CTGACGGCAC GCGGCAAGGA GATTTTCGAG CACGGCTTGC CAGCTGAAGG CGTGCCGGCC
TGCGCGTCTT GTCATGGAGC GCAGGCGCAG GGCAATGACA CGTTTCCCCG TTTGGCAGGA
CAACACGAGG CCTATCTGCT GCGACAGATC AGTGTCTTCA AGAACGGCAC GCGCGCCAAT
GCACCCGTGA TGAGTGCCGT TGCGCACACC CTGACGGACG AACAGGCGAA AGCGGTCGCT
GCATTCTTGC AAGCTCAGTA A
|
|---|
| Protein sequence | MKGFHQPRRV WLAGLVTLAT IGWSVTVGAQ DGEKLAAQLC ASCHGVHGKS ESPMFPRLDA
QMPHYLEAQL KGFRDRGRGE TDAQAFMWGI ASQLDDVTIA SLAEYYARQT APAGAAGDPA
LTARGKEIFE HGLPAEGVPA CASCHGAQAQ GNDTFPRLAG QHEAYLLRQI SVFKNGTRAN
APVMSAVAHT LTDEQAKAVA AFLQAQ
|
|---|
| |