Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0167 |
Symbol | |
ID | 1218970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 187938 |
End bp | 188363 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637236524 |
Product | hypothetical protein |
Protein accession | NP_518288 |
Protein GI | 17544886 |
COG category | [S] Function unknown |
COG ID | [COG2246] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.319127 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.557481 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCGCG CGTCGGCTGC CGTCAAGCCG ATCTTCCTGT CGAGGCATTT CCTGCTGTTC CTGCTGACCG GCGGCATCGC CGCCGCGGTC AACTGGGGGA GCCGGATCGC CTACAACCTC TGGATGCCCT ACTCCGCCGC GATCGTCGTC GCCTATGTCA CGGGGATGAT CACGGCGTTC GTTTTGGCGA AGCTGTTCGT CTTTACCGAG AGCACGCAGT CCACCGCGCG ATCGATCGTC TTCTTCACGC TGGTGAACCT GGTGGCCGTG CTGCAGACCT GGGGCGTGAG CGTCGGCCTC GCTTACTACG TGTTTCCCCG GCTGGGCCTG GATTGGCATG CGCGGGAAAT CGCACACCTC GTCGGTGTGG CGGTGCCCGT GTTCACGAGC TACATCGGGC ACAAGCGATG GAGCTTCAAG CACTAG
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Protein sequence | MTRASAAVKP IFLSRHFLLF LLTGGIAAAV NWGSRIAYNL WMPYSAAIVV AYVTGMITAF VLAKLFVFTE STQSTARSIV FFTLVNLVAV LQTWGVSVGL AYYVFPRLGL DWHAREIAHL VGVAVPVFTS YIGHKRWSFK H
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