Gene RSc0167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0167 
Symbol 
ID1218970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp187938 
End bp188363 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content64% 
IMG OID637236524 
Producthypothetical protein 
Protein accessionNP_518288 
Protein GI17544886 
COG category[S] Function unknown 
COG ID[COG2246] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.319127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.557481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCGCG CGTCGGCTGC CGTCAAGCCG ATCTTCCTGT CGAGGCATTT CCTGCTGTTC 
CTGCTGACCG GCGGCATCGC CGCCGCGGTC AACTGGGGGA GCCGGATCGC CTACAACCTC
TGGATGCCCT ACTCCGCCGC GATCGTCGTC GCCTATGTCA CGGGGATGAT CACGGCGTTC
GTTTTGGCGA AGCTGTTCGT CTTTACCGAG AGCACGCAGT CCACCGCGCG ATCGATCGTC
TTCTTCACGC TGGTGAACCT GGTGGCCGTG CTGCAGACCT GGGGCGTGAG CGTCGGCCTC
GCTTACTACG TGTTTCCCCG GCTGGGCCTG GATTGGCATG CGCGGGAAAT CGCACACCTC
GTCGGTGTGG CGGTGCCCGT GTTCACGAGC TACATCGGGC ACAAGCGATG GAGCTTCAAG
CACTAG
 
Protein sequence
MTRASAAVKP IFLSRHFLLF LLTGGIAAAV NWGSRIAYNL WMPYSAAIVV AYVTGMITAF 
VLAKLFVFTE STQSTARSIV FFTLVNLVAV LQTWGVSVGL AYYVFPRLGL DWHAREIAHL
VGVAVPVFTS YIGHKRWSFK H