Gene RSc0162 details

Gene Information

• Locus tag: RSc0162
• ID: 1218965
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 182616
• End bp: 183317
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 637236519
• Product: transcription regulator protein
• Protein accession: NP_518283
• Protein GI: 17544881

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.1146
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.445023
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGCGCGAGG ATCTGCGCGA CCGCCTGCTC GACATCGCCG TGCAGCGGTT CGCGCGCGAC 
GGCATCGACG CGACCACGAT GGCCGCCATC GCCCGCGAGG CGGGGGTGAC GGCACCGATG 
GTGCACTACC ACTTCGCCAC GCGCGACCAG TTGCTGGACG CCGTGGTGGA CATGCGTCTG 
AAGCCGTTGA TCGACGAGGT CATGGATCCG GCGCTGACCG CGATCCCCGA CGATGGCCAC 
GCGCCCGAAC TGGCGCGCAT CGTGGCCGGA GCGGCGCAGC GCATGGTGGC GGTGGCCTCG 
GCCACGCCGT GGTTCCCGAC GCTGTGGATC CGCGAGATCG CCAGCGAGGG CGGGCAGCTG 
CGCGAACGCG TGTTCGCGCG CATCGCGCTG GAGCGCGCGA CGGTGCTGGT CGAGCGCATC 
GCCCGCGCGC AGGCGGCCGG CGCGGTCAAC GCGGCATTGG AGCCAACGCT GGTGATGGTC 
TCGGTGATCG GGCTGGCGAT GCTGCCGCTG GCCACGCGCG CGCTGTGGGG CCGCCTGCCC 
CACGCGGAGA CGATCGACGC GCAGGCCATC GGCCGGCACG TGGCGGCGCT GCTGCTGCAT 
GGCGTGGGGC CCGCCCCGGC GAGCAGCGGC AACGCCGCGG AAAAGGCAGG CAAGGCAGGG 
CGCAAGGCAC GGCGGCAGCA GGCGGATCAA TCTAACCGGT GA 

 

Protein sequence

MREDLRDRLL DIAVQRFARD GIDATTMAAI AREAGVTAPM VHYHFATRDQ LLDAVVDMRL 
KPLIDEVMDP ALTAIPDDGH APELARIVAG AAQRMVAVAS ATPWFPTLWI REIASEGGQL 
RERVFARIAL ERATVLVERI ARAQAAGAVN AALEPTLVMV SVIGLAMLPL ATRALWGRLP 
HAETIDAQAI GRHVAALLLH GVGPAPASSG NAAEKAGKAG RKARRQQADQ SNR