Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0155 |
Symbol | |
ID | 1218958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 175246 |
End bp | 176439 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637236512 |
Product | hypothetical protein |
Protein accession | NP_518276 |
Protein GI | 17544874 |
COG category | [S] Function unknown |
COG ID | [COG1565] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.621796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAA CCGTAAGTTT ACCGCTTCCC AGCGAGGCCG CGCAGGCGCA GTCCGACCGC CTGTTCTCCA CCATCGTCCG CGCCGTCGAG GCCGCCGGCG GCTGGCTCCC GTTCGAGCGC TACATGGAAC TGGCGCTGTA CGCGCCGGGC CTGGGCTACT ACAGCGGCGG CGCGGCCAAG TTCGGCCGCC GCGTGGAAGA CGGCGGAGAC TTCATCACCG CACCGGAACT GACGCCGTTC TTCGGCCGCA CCGTCGCGCA CCAGATCGCC CAGGTCCTGC AGACGCTGCC GCCCGGCCAG CGCCATGTGC TGGAGTTCGG CGCGGGCACC GGCAGGCTCG CGGCCGACAT CCTGACCGAG CTGGAGACGC TCGGCATGCG GCCGGATAGC TACGGCATCG TCGAGCTCTC TGGCGAACTG CGCCAGCGCC AGCAACAGGC CCTGGCCGCG CTCGGCCCAG ACCTGGCCGG CCTGGCCCGG TGGCACGATG CGCTGCCCGC GCGCTTCACC GGCGTGATGG TCGGCAACGA GGTGCTCGAT GCGATGCCCG TGTCGCTGTG GGCGCGGCGC GGCGGCGTCT GGCACCGGCG CGGCGTGGCC TTCGATGCGG ACCACGGCCT GCGGTGGTCC GAGCGCGTGG CCGATCCGGC CGATGTCCCG CCCAAGCTGG CCGCCCTGCC CGGCCGCGAT GACTTCGTCA CCGAAGCGCA CGAAGCCGCC GAGGGCTTCA TCCGCAGCGC CGGCGCGGCG CTCGAGCGCG GCCTGCTGCT GCTGCTCGAC TACGGCTTTC CGGCCGGCGA GTACTACCAC GCGCACCGCG CCAACGGCAC GCTGATGTGC CACTACCGCC AGCACGCGCA CGACGATCCG TTCTGGCTGC CGGGGCTGCA GGACATCACC GCGCACGTCG ACTTTTCCGG CATTGCGCTG GCGGCGCGCG AGGCAGGGCT GGAAGTGCTC GGCTATGCAA GCCAGGCGCG CTTCCTGTTG GGCGCCGGCG TGGGGCAGTT GCTGATGACG CTCGACCCCG CCGATCCGGT CCGCTTCCTG CCAGCCGCCA ACGCGGTACA GAAGCTGCTG TCGGAAGCGG AGATGGGCGA GCTGTTCAAG GCCATCGCGC TCGGCCGGGG CCTCGACGCG GCGCTGCCGC TGGCGGGCTT TGCCGATGCG GACCGCTCGG ACCGGCTAGG CTGA
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Protein sequence | MSKTVSLPLP SEAAQAQSDR LFSTIVRAVE AAGGWLPFER YMELALYAPG LGYYSGGAAK FGRRVEDGGD FITAPELTPF FGRTVAHQIA QVLQTLPPGQ RHVLEFGAGT GRLAADILTE LETLGMRPDS YGIVELSGEL RQRQQQALAA LGPDLAGLAR WHDALPARFT GVMVGNEVLD AMPVSLWARR GGVWHRRGVA FDADHGLRWS ERVADPADVP PKLAALPGRD DFVTEAHEAA EGFIRSAGAA LERGLLLLLD YGFPAGEYYH AHRANGTLMC HYRQHAHDDP FWLPGLQDIT AHVDFSGIAL AAREAGLEVL GYASQARFLL GAGVGQLLMT LDPADPVRFL PAANAVQKLL SEAEMGELFK AIALGRGLDA ALPLAGFADA DRSDRLG
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