| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0102 |
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| Symbol | |
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| ID | 1218905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 114282 |
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| End bp | 117935 |
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| Gene Length | 3654 bp |
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| Protein Length | 1217 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637236459 |
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| Product | putative calcium binding hemolysin protein |
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| Protein accession | NP_518223 |
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| Protein GI | 17544821 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CAACGGAACA GGACACTAGT CGCCAATGGC GGTAACGACC AACTTTACGG CGGCGCCGGC
AACGACTCCC TGCGCATCAA CAACAACGCC ACCGCTTCCG TCGACGGTGG CGACGGCAAC
GACACCATCT CCGCCGACAG CGGCACCACC TCCACCATCT CCGCCGGCAA CGGCGACGAC
ACCGTCCAGA TCGGCGCATG GGCTATGCGC ACGACCATCG ACGCTGGCAA CGGCAACGAC
ATCATCAACA TCGATCCCTA CGGCGCCTCG CAAGGCGCCG ACATCACCGG CGGCACCGGC
GACGACCAGA TCCGTCTCGG CTACTACGGC GCCACCCTGC ACTTCAACCG TGGCGACGGC
CATGACACCG TCTCCTCCGC CGCCAACGCC GGCAACAAGA CCATCGTCTT CGGCCCCGGC
ATCAGCGCCG CCGACCTCTC CGCCACCCGC GTCGGCAACG ACATGGTCCT GAGCATCGGC
GCCAATGGCG ATGCCATCAC CATCACCAAC TGGTTCCAGT TGGACGGCTC GAAGCGCATC
GACACTGCCG TCTTTGCCGA TGGCACCCGA TGGAATGCCG ACAACTTCCG CCGCCTCATC
ACCACCGTAA CCGGTACCGC CGGTGACGAC ACCATCAACG GCTGGCAGGG CGATGACGTC
CTCGTCGGTG GCGACGGCAA CGACACCCTA GTCGCCAATG GCGGTAACGA CCAACTTTAC
GGCGGCGCCG GCAACGACTC CCTGCGCATC AACAACAACG CCACCGCTTC CGTCGACGGT
GGCGACGGCA ACGACACCAT CTCCGCTGAC AGCGGCACCA CCTCCACCAT CTCCGCCGGC
AACGGCGACG ACACCGTCCA GATCGGCGCA TGGGCTATGC GCACGACCAT CGACGCTGGC
AACGGCAACG ACATCATCAA CATCGATCCC TACGGCGCCT CGCAAGGCGC CGACATCACC
GGCGGCACCG GCGACGACCA GATCCGTCTC GGCTACTACG GCGCCACCCT GCACTTCAAC
CGTGGCGACG GCCATGACAC CGTCTCCTCC GCCGCCAACG CCGGCAACAA GACCATCGTC
TTCGGCCCCG GCATCAGCGC CGCCGACCTC TCCGCCACCC GCGTCGGCAA CGACATGGTC
CTGAGCATCG GCGCCAATGG CGATGCCATC ACCATCACCA ACTGGTTCCA GTTGGACGGC
TCGAAGCGCA TCGACACTGC CGTCTTTGCC GATGGCACCC GATGGAATGC CGACAACTTC
CGCCGGCTCG TCACCACCGT AACAGGTACC GCCGGTGACG ACACCATCAA CGGCTGGCAG
GGCGACGATA TCCTCATCGG TGGTGACGGC AACGACACCC TAGTCGCTAA TGGCGGTAAC
GACCAGCTTT ACGGCGGCGG CGGCAACGAC TCCCTGCGTG TCAACGACAA CGCATCCGCC
TCTGTCGACG GTGGCGACGG CAACGACACC ATCTCCGCTG ACAGCGGCAC CACCTCCACC
ATCTCCGCCG GCAACGGCGA CGACACCGTC CAGATCGGCG CATGGGCTAT GCGCACGACC
ATCGACGCTG GCAACGGCAA CGACATCATC AACATCGATT CCTACGGCGC CTCGCAGGGC
GCCGACATCA CCGGCGGCAC CGGCGATGAC CAGATCCGTC TCGGCTACTA CGGCGCCACC
CTGCACTTCA ACCGTGGCGA CGGCCATGAC ACCGTCTCCT CCGCCGCCAA CGCCGGCAAC
AAGACCATCG TCTTCGGCCC CGGCATCAGC GCTGCCGATC TCTCCGCCAC CCGCGTCGGC
AACGATATGA TCCTGAACGT CGGCGCCAAT GGTGACGCTA TCACCATCAC GAACTGGTTC
TTGTTGGATG GCTCCAAGCG CATCGACACT GCCGTCTTCG CCGATGGCAC CCGATGGAAT
GCCGACAACT TCCGCCGCCT CATCACCACC GTCACCGGTA CCGCCGGCGA CGACACCATC
AACGGCTGGC AGGGCGATGA CGTCCTCGTC GGTGGCGATG GCAACGACAC CCTCATCTCC
AACGGCGGTA ACGACCAACT TTACGGCGGC GGCGGCAACG ACTCCCTGCG CATCAACGAC
AACGCCACCG CCTCTGTCGA CGGTGGCGAC GGCAACGACA TCATCTCCGC CGACAGCGGC
ACCACCTCCA CCATCTCCGC CGGCAACGGC GACGACACCG TCCAGATCGG CGCATGGGCT
ATGCGCACGA CCATCGACGC TGGCAACGGC AACGACATCA TCAACATCGA TTCCTACGGC
GCCTCGCAGG GCGCCGACAT CACCGGCGGC TCCGGCGATG ACCAGATCCG TCTCGGCTAC
TACGGCGCCA CCCTGCACTT CAATCGCGGC GACGGCCATG ACACCGTCTC ATCCGCCGCC
AACGCCGGCA ACAAGACCGT CGTCTTTGGC CCCGGCATCA GCGCTGCCGA TCTCTCCGCC
ACCCGCCTCG GCAACGATAT GATCCTGAAC GTCGGCGCCA ATGGTGACGC TATCACCATC
ACGAACTGGT TCTTGTTGGA TGGCTCCAAG CGCATCGACA CTGCCGTCTT CGCCGATGGC
ACACGCTGGA ACGCCGATCA CTTCCGCCGC CTCATCACCA CCGTCACCGG CACCGCCAGC
GACGACGCCA TCAACGGCTG GCAGGGCGAT GACGTCCTCG TCGGTGGCGA CGGCAACGAC
TCCCTCATCT CCAACGGCGG TAACGACCAA CTTTACGGCG GCGGCGGCAA CGACTCCCTG
CACATCAACA ACAACGCCAC CGCCTCTGTC GACGGTGGCG ACGGCAACGA CACCATCTCC
GCCGACAGCG GCACCACCTC CACCATCTCT GCCGGCAACG GCGATGACAT CGTCCAAATC
GGTGCCTGGT CCTTCCGGAG CACCATCGAT GGCGGCGCCG GCAACGACAT CATCAAGATC
GACACCTACG GTGCCTCTCA AGGCGCCGAC ATCGCCGGTG GCACTGGCGA CGACCAGATC
AGCCTCGGCT ACTACGGCGC CACCCTGCGC TTCAACCGTG GCGACGGCCA TGACACCGTC
TCCTCCGCCG CCAACGCCGA CAACAAGACC ATCGTCTTCG GCAGCGGCAT CACCGCAGCC
AACCTCTCCG CTACCCGCGT CGGCGACGAC ATGGTCCTGA ATATCGGCGC CAATGGCGAT
GCCATCACCA TCACCAACTG GTTCCAAAGC GGGCAATATC GTCTGCGCAA CCTGATGTTC
GCAGACGGCA CGACCATTGA CGCCACCGGT CTCGTCGCCA CTTATAACGT CAACGCCTCA
AGCGGTACCA CCAAGATCCA GGCACTCACC GGCTTTGACG ATAAGCCATT GGCCGACGTC
ATCAACTTCA AGACGGCGAA TAGTCGCCAA CTGTGGTTTG AACGGCAGGA CGATGATCTG
CTTGTGTCCG TCATCGGCAG CCACGACGTA GCCGACTTCA CTGACTGGTA CAGCATGTCA
ACTCACCAGA ACCTGCAGTT GCGCGCAACA GATGGCTTAT CGCTGACCGG TCAGCAGGTC
GATGCACTGG TGCAGGCGAT GGCACAGTTC TCGGCGCCGC CCGCAGGCCA GACCACGTTG
ACGCCAGAGC TACAGGACAA GCTGGCGCCA GTGATCGCCG CAAACTGGCA CTGA
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| Protein sequence | QRNRTLVANG GNDQLYGGAG NDSLRINNNA TASVDGGDGN DTISADSGTT STISAGNGDD
TVQIGAWAMR TTIDAGNGND IINIDPYGAS QGADITGGTG DDQIRLGYYG ATLHFNRGDG
HDTVSSAANA GNKTIVFGPG ISAADLSATR VGNDMVLSIG ANGDAITITN WFQLDGSKRI
DTAVFADGTR WNADNFRRLI TTVTGTAGDD TINGWQGDDV LVGGDGNDTL VANGGNDQLY
GGAGNDSLRI NNNATASVDG GDGNDTISAD SGTTSTISAG NGDDTVQIGA WAMRTTIDAG
NGNDIINIDP YGASQGADIT GGTGDDQIRL GYYGATLHFN RGDGHDTVSS AANAGNKTIV
FGPGISAADL SATRVGNDMV LSIGANGDAI TITNWFQLDG SKRIDTAVFA DGTRWNADNF
RRLVTTVTGT AGDDTINGWQ GDDILIGGDG NDTLVANGGN DQLYGGGGND SLRVNDNASA
SVDGGDGNDT ISADSGTTST ISAGNGDDTV QIGAWAMRTT IDAGNGNDII NIDSYGASQG
ADITGGTGDD QIRLGYYGAT LHFNRGDGHD TVSSAANAGN KTIVFGPGIS AADLSATRVG
NDMILNVGAN GDAITITNWF LLDGSKRIDT AVFADGTRWN ADNFRRLITT VTGTAGDDTI
NGWQGDDVLV GGDGNDTLIS NGGNDQLYGG GGNDSLRIND NATASVDGGD GNDIISADSG
TTSTISAGNG DDTVQIGAWA MRTTIDAGNG NDIINIDSYG ASQGADITGG SGDDQIRLGY
YGATLHFNRG DGHDTVSSAA NAGNKTVVFG PGISAADLSA TRLGNDMILN VGANGDAITI
TNWFLLDGSK RIDTAVFADG TRWNADHFRR LITTVTGTAS DDAINGWQGD DVLVGGDGND
SLISNGGNDQ LYGGGGNDSL HINNNATASV DGGDGNDTIS ADSGTTSTIS AGNGDDIVQI
GAWSFRSTID GGAGNDIIKI DTYGASQGAD IAGGTGDDQI SLGYYGATLR FNRGDGHDTV
SSAANADNKT IVFGSGITAA NLSATRVGDD MVLNIGANGD AITITNWFQS GQYRLRNLMF
ADGTTIDATG LVATYNVNAS SGTTKIQALT GFDDKPLADV INFKTANSRQ LWFERQDDDL
LVSVIGSHDV ADFTDWYSMS THQNLQLRAT DGLSLTGQQV DALVQAMAQF SAPPAGQTTL
TPELQDKLAP VIAANWH
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