| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0055 |
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| Symbol | |
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| ID | 1218857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 60624 |
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| End bp | 61601 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637236411 |
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| Product | putative signal peptide protein |
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| Protein accession | NP_518176 |
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| Protein GI | 17544774 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.250308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCGC AACGCGCGGT GATGCGCCGG GTGCGTCGCG CATCGCGTGC CCTGTCGCGC
GGGCTGGCCG GCGTGCTGCT GGCAACGAGC GCGCTCGCCA GCGCGCAGCC CGACATGCCG
GCCGCCCATG CGCCGTCGGC GGCGGAACTG GGCGTGCAGA CCGTGCAGAT TCCGCGCGCC
GTCATGAAGG ATGCCGAGGA CGCGCCGCAG ACGCTGACCG CATACTGGAT CGCGCCGGGC
CGCAAGAGCG CCGCCGCCGG CGCGCCGGTG GTGGTCGCGC TGCACGGCTG CGGCGGCCTG
TACACGCCGG CCGGCGCGGA CGCCATGGCG CTCGGCGAAC GCTATCGCGG CTACGCGCAA
TGGCTGGCCG CACGCGGCTA TGCGGTGGTG CTGCCCGATA GCTTCGGCCC GCGCGGCAAG
CCGCACGGCA TCTGCACCGA GCCGACGGCC GGGCGCAGCA TCGACGGCGC GGCGCGGCGT
GCCGACATCC TGGCGACGCT GCGCTGGATT GCCGCGCAGC CCGGACTGGA CACGCGCCAC
ATCGTGCTGC TCGGCTGGTC CAACGGCGCG CAGGCGGTGC TGGACACCGT GGATGCCAGC
CGCACCTGGC CCGCCGGCAC GCCGGACGTG GAGCGCGCGG TGGCGTTCGA CCCCGGCTGC
CTCGCCGCGC TGCGACGTCC GGCCTACCGG CTGAACGCGC CGCTGCTGCT GTTGGCCGGC
GCCTACGACG ACTGGACGCC CGCCGACCGC TGCCAGGCCC TGCAAAGCGC GGTGCTGGCC
CGCCAGCCGC AGGCGCGCTT CGCGCTGGAG CAGCTCGGCG GCACTGACCA TGGCTTCGAC
GGCACGGCAC CGCTCGCGCC GCGCAAGGAC ATCCCGGACG GCGCGCGCCA TGGCACCGTC
ACGATCGGCG GCGATCCGGC GGCGCGCGAA GCGGCCTTCA CGCAGCTGGC GGCATGGCTG
GATAATCCGC ACCCTTGA
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| Protein sequence | MRPQRAVMRR VRRASRALSR GLAGVLLATS ALASAQPDMP AAHAPSAAEL GVQTVQIPRA
VMKDAEDAPQ TLTAYWIAPG RKSAAAGAPV VVALHGCGGL YTPAGADAMA LGERYRGYAQ
WLAARGYAVV LPDSFGPRGK PHGICTEPTA GRSIDGAARR ADILATLRWI AAQPGLDTRH
IVLLGWSNGA QAVLDTVDAS RTWPAGTPDV ERAVAFDPGC LAALRRPAYR LNAPLLLLAG
AYDDWTPADR CQALQSAVLA RQPQARFALE QLGGTDHGFD GTAPLAPRKD IPDGARHGTV
TIGGDPAARE AAFTQLAAWL DNPHP
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