Gene RSc0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0048 
Symbol 
ID1218850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp52574 
End bp53092 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content73% 
IMG OID637236404 
Productputative transcription regulator protein 
Protein accessionNP_518169 
Protein GI17544767 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCC CGGCTCCACG CGACGTTCCC ACCACTTCTC ATCCGGATGC GCCCGAAGCG 
GCGGCCCGGG CGCGCCTGCG CGGGCTGGGC AGCCGCGTGA CCGAGCCGCG CGTGCGCGTG
CTGGCCGCAT TGATGCAGGG CGATGCCCCG CTGTCGCACC AGGCCGTCTG CGACGCGCTG
CCCGCCGATG CCGGCATCGA CCGCGTGACG GTCTACCGCG TGCTCGACTG GCTGGTGGCC
GGCGGCATCG TCCACAAGAC GGCCGGCGCC GACCGCGTGT TCCGCTTCAG CCTCGCCGAG
CACGACGCTG CGCGCGAAGC CGCGCACCGG GCCCACAGCC ACTTCCACTG CACCCAGTGC
GGGCGGGACT TCTGCCTGGA AACGGCCACG CCGCCGGCCG TGCCGACGCC CGCCCTGCCT
GCCGGCTTCG CCGCCGACCA CGCCGAACTC ACCATCAAGG GCTGCTGCGC CGACTGCGCC
GCCCGCCACC AGACAGGAAA CGCACCATGT CCAAACTGA
 
Protein sequence
MNSPAPRDVP TTSHPDAPEA AARARLRGLG SRVTEPRVRV LAALMQGDAP LSHQAVCDAL 
PADAGIDRVT VYRVLDWLVA GGIVHKTAGA DRVFRFSLAE HDAAREAAHR AHSHFHCTQC
GRDFCLETAT PPAVPTPALP AGFAADHAEL TIKGCCADCA ARHQTGNAPC PN