Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0048 |
Symbol | |
ID | 1218850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 52574 |
End bp | 53092 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637236404 |
Product | putative transcription regulator protein |
Protein accession | NP_518169 |
Protein GI | 17544767 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGCC CGGCTCCACG CGACGTTCCC ACCACTTCTC ATCCGGATGC GCCCGAAGCG GCGGCCCGGG CGCGCCTGCG CGGGCTGGGC AGCCGCGTGA CCGAGCCGCG CGTGCGCGTG CTGGCCGCAT TGATGCAGGG CGATGCCCCG CTGTCGCACC AGGCCGTCTG CGACGCGCTG CCCGCCGATG CCGGCATCGA CCGCGTGACG GTCTACCGCG TGCTCGACTG GCTGGTGGCC GGCGGCATCG TCCACAAGAC GGCCGGCGCC GACCGCGTGT TCCGCTTCAG CCTCGCCGAG CACGACGCTG CGCGCGAAGC CGCGCACCGG GCCCACAGCC ACTTCCACTG CACCCAGTGC GGGCGGGACT TCTGCCTGGA AACGGCCACG CCGCCGGCCG TGCCGACGCC CGCCCTGCCT GCCGGCTTCG CCGCCGACCA CGCCGAACTC ACCATCAAGG GCTGCTGCGC CGACTGCGCC GCCCGCCACC AGACAGGAAA CGCACCATGT CCAAACTGA
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Protein sequence | MNSPAPRDVP TTSHPDAPEA AARARLRGLG SRVTEPRVRV LAALMQGDAP LSHQAVCDAL PADAGIDRVT VYRVLDWLVA GGIVHKTAGA DRVFRFSLAE HDAAREAAHR AHSHFHCTQC GRDFCLETAT PPAVPTPALP AGFAADHAEL TIKGCCADCA ARHQTGNAPC PN
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