Gene WD1240 details

Gene Information

• Locus tag: WD1240
• Symbol: rnc
• ID: 2738188
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Wolbachia endosymbiont of Drosophila melanogaster
• Kingdom: Bacteria
• Replicon accession: NC_002978
• Strand: +
• Start bp: 1187647
• End bp: 1188345
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637173392
• Product: ribonuclease III
• Protein accession: NP_966952
• Protein GI: 42521037
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAGTT TGAATGATGC AATATCTAAG ATCATTGATT ATAAATTTAC AAATTATGCA 
ATATTAGAAG AGGCACTAAC TCACCCAAGC GTAAATAAAA GAAATAGCAA AAACCAGATT 
GTAAGCTACG AAAGACTAGA GTTTTTGGGC GATAGTGTTT TGAATATGGT TGTATCTGCC 
ACACTGTTTA AACTATTTCC TGAAGAAAAA GAAGGAGCAT TGGCAAAAAG AAAGACGGAT 
TTAGTTTGTG GCAACACCAT TGCTAATGTT GCTAAAGAAA TAAAATTAGG CAGCTTTATC 
ATCATGAATA ATAGTGAACG CTGCAATGGA GGGAGATGTA ACTTAAAAAA TTTAGAAAAC 
TCGCTTGAAG CACTAATAGG TGCAATTTAT ATTGATGGCG GGCTTGAAAA TGTTGAAAAA 
TTTATTATCC AATATTGGGA AAAGCTAGCT AAAGGCATGC TTGACCCCCC TCAAGATCCT 
AAAACCTCAC TGCAAGAGTG GACTCAGAAA AACAAATTGC CTTTACCAGA GTATGAGCTT 
GTAAAACAAA CTGGACCAGC GCACAATCCT GAATTTACTA TATCAGTTTG CATAGAAGAT 
TATGGTAAAG TTTCTGCATG CGCTTCTAGT AAAAAGATTG CTGAACAAAA AGCTGCTGAG 
TTGATGCTAG AAAAAATTGG AAAAGACGCT TCAGTTTAG 

 

Protein sequence

MKSLNDAISK IIDYKFTNYA ILEEALTHPS VNKRNSKNQI VSYERLEFLG DSVLNMVVSA 
TLFKLFPEEK EGALAKRKTD LVCGNTIANV AKEIKLGSFI IMNNSERCNG GRCNLKNLEN 
SLEALIGAIY IDGGLENVEK FIIQYWEKLA KGMLDPPQDP KTSLQEWTQK NKLPLPEYEL 
VKQTGPAHNP EFTISVCIED YGKVSACASS KKIAEQKAAE LMLEKIGKDA SV