Gene WD1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagWD1001 
Symbolxth 
ID2737807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameWolbachia endosymbiont of Drosophila melanogaster 
KingdomBacteria 
Replicon accessionNC_002978 
Strand
Start bp958612 
End bp959391 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content35% 
IMG OID637173158 
Productexodeoxyribonuclease III 
Protein accessionNP_966728 
Protein GI42520813 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0471864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAAGA TTGCAACTTG GAATGTAAAC TCCATACGTA AAAGAGTTAA CCAACTTTGT 
AGTTTTATAG TTGATAGTCA GATAGATATA GTTTTGCTGC AAGAGATAAA ATGTACGGAA
GAGCAATTTC CTTATGCGGA GATAGAAAAG TTAGGATATG AATATGCTAT CTATGGACAA
GTTGCAAGAA ATGGCGTTTG TGTTTTATCT AAATATCCGA TACTGGAGAA GTTTAAAATT
GACATTGTGG AAAGTCATCA AGAAGCACGT TATATAGAGT GCGTGATAAA GTATACCAAT
AGTAAGATAA GGGTAGGAAG TGTATACGTG CCAAACGGTC AAAGCCCGGA CTCTCACGCA
TTTGAATATA AACTCAAGTT TTTTGATAAC CTATATGAAA GGATGAGCAC TTTGTTGAAG
AATGAAGAGT TAACTATTAT AGCTGGCGAT TATAATATTG CACCGGATGA AATTGATGTT
TTTGATTCAA ACTTATTGAA TGGCCAAGTG TGCTTTCATA TAAGAGAACG TGAGAAGTTA
AGAGCGATCT TGAATCTTGG GTTTAAAGAT GCGTTTAGAA TATCTCACCC AAATTTGCAA
CAATTCACTT GGTGGCATTA TCAAGGCAAT TCACTCAGAA ATAATCAAGG AATGCGAATA
GATTATATGC TGTTATCACC ACAAGCTGTA GATAAATTGG AAACATGCTA CATAGATGAT
AGATTGCGTA AGCTAGAAAA TCCGTCTGAC CATACTCCTG TTGTATGTGC TATAGAATAA
 
Protein sequence
MLKIATWNVN SIRKRVNQLC SFIVDSQIDI VLLQEIKCTE EQFPYAEIEK LGYEYAIYGQ 
VARNGVCVLS KYPILEKFKI DIVESHQEAR YIECVIKYTN SKIRVGSVYV PNGQSPDSHA
FEYKLKFFDN LYERMSTLLK NEELTIIAGD YNIAPDEIDV FDSNLLNGQV CFHIREREKL
RAILNLGFKD AFRISHPNLQ QFTWWHYQGN SLRNNQGMRI DYMLLSPQAV DKLETCYIDD
RLRKLENPSD HTPVVCAIE