Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | WD1000 |
Symbol | |
ID | 2737803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
Kingdom | Bacteria |
Replicon accession | NC_002978 |
Strand | + |
Start bp | 957905 |
End bp | 958612 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637173157 |
Product | uroporphyrinogen-III synthase, putative |
Protein accession | NP_966727 |
Protein GI | 42520812 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0374763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTCTA TTTTATTAAC GAGGCCTTTA TTGGATTCGT TCAATACAAG AAATATATTG AGAAAGTATG GATACAAAGT TTATATAGAA CCAGTATTCA CAATAAAGTA CTTAAATCCT GATATATCTG CACACGAATT TGACGTTGTA ATATCCACAA GTAAAAACAG TGTAAAGGCT TTTAGTCAAA TATGCAAAGT GGATGACTTT CCGATTATTA CAGTTGGTAA TTCAACCATG CAGGCTGCAA AAAATTTGGG ATTTTCTGAT ATAATCTCAG CAGACAGCAA CGTTGATGGT CTGATATCAT TCATAAAAGC TCACTATTCA AGTGCAATAA AGTTCTTATA TATAAGAGGA CAAGAAGTAT CATGTGACCT AAAAAAGAGA TTATCTGAAG AAGATTTTAA CGTAAGAGAA GTTGTACTCT ATAAAACAAT CATTAAAAGG AGTCTAACTA ATAGGTGTAA AAATTTACTG TTGGATGGTA AAATTGGTAG TGTTGCTTTT TTTTCCTCAC AGACAGCAAG GGTATTTTGT TCATTAGTTC TAAAAAGTGG GCTATCTCAT GTGATGAATA ATACAGTTGC ATATACCATG AGTAAAAACA TTGCTGATAG TTTAAAGTTA ATCAAGTGGA AAAAAATTAT AACATCGAGG TTGCCTACTG GGGAGAGTTT AATTGATATA ATTAATAAGG ATTGCTGA
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Protein sequence | MKSILLTRPL LDSFNTRNIL RKYGYKVYIE PVFTIKYLNP DISAHEFDVV ISTSKNSVKA FSQICKVDDF PIITVGNSTM QAAKNLGFSD IISADSNVDG LISFIKAHYS SAIKFLYIRG QEVSCDLKKR LSEEDFNVRE VVLYKTIIKR SLTNRCKNLL LDGKIGSVAF FSSQTARVFC SLVLKSGLSH VMNNTVAYTM SKNIADSLKL IKWKKIITSR LPTGESLIDI INKDC
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