Gene WD0781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagWD0781 
SymbolrpsF 
ID2737984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameWolbachia endosymbiont of Drosophila melanogaster 
KingdomBacteria 
Replicon accessionNC_002978 
Strand
Start bp756598 
End bp757371 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content32% 
IMG OID637172956 
Product30S ribosomal protein S6 
Protein accessionNP_966535 
Protein GI161378181 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0360] Ribosomal protein S6 
TIGRFAM ID[TIGR00166] ribosomal protein S6 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0213362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATCTTT ATGAATTTAC TTTTATAGCA CAACAAGGAT TGTTACAGCA AGAAGTAGAG 
GAGATGGTCC AAGAGCTAGC TGTTTCATTG AAAAATATTA AAGCAGATAT TATGTTCCAG
CAAATCAGGG ATATTCTGAA AAAAGGAAAT GACAAGCTTA CAAAACAAGA GTTAGAAGTG
CGTGCTGAGG ACATTAAAGA AAGTCTAGTT GCTTACTCTG ATTTCTTGGA AGATCTTACA
AAAATTTTAT GGGTTGAATT AGAAGAAGAT CTTTCAAATT TGAAAGAAGT GAAGTCAAAA
ATCGATAAAG AGTTGAAAGA TGACCTAAAA GATTTAGGAA TAACGCAAGA TTTTACAAAA
TTTCTAGGAG GCAGTACTAA AAGTGCGTTT ATCCATAACG CAGTAAATGC TTTGAAGAGA
AATATTTCAG AACATCTAAT AAAGATTTTT CAAGATATTT TGAAAGATTT TAGAATAAAC
GGTCCAACTC AATCGAGCAA AGCGTTGGAA ATGCTTTTGA AAAACATTGA AGCATCAGGA
TTAATCAAGT ATGAACATTG GGGTCTTTTG GATTTTGCAT ATCACAAAAA TAAAATGAAG
AGCGGTCATT ATTGTATAAT GTGCATAAGT TCTACTGCAA GCATTCTGGA TGAATTTATG
CGTAGAATGA AACTTAATGA GAACGTTATT CGCCACTTTC CTGTGCAGGT TGATAAAATT
TTTGAAGGTA AATCTCATAT GATGAATAAA CAAATTGAGG AGCAAAGCGC ATAA
 
Protein sequence
MNLYEFTFIA QQGLLQQEVE EMVQELAVSL KNIKADIMFQ QIRDILKKGN DKLTKQELEV 
RAEDIKESLV AYSDFLEDLT KILWVELEED LSNLKEVKSK IDKELKDDLK DLGITQDFTK
FLGGSTKSAF IHNAVNALKR NISEHLIKIF QDILKDFRIN GPTQSSKALE MLLKNIEASG
LIKYEHWGLL DFAYHKNKMK SGHYCIMCIS STASILDEFM RRMKLNENVI RHFPVQVDKI
FEGKSHMMNK QIEEQSA