Gene WD0388 details

Gene Information

• Locus tag: WD0388
• Symbol: rpsD
• ID: 2738134
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Wolbachia endosymbiont of Drosophila melanogaster
• Kingdom: Bacteria
• Replicon accession: NC_002978
• Strand: +
• Start bp: 371395
• End bp: 372009
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637172594
• Product: 30S ribosomal protein S4
• Protein accession: NP_966180
• Protein GI: 42520265
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAACTG TTATCACTAG AAAGTATAGG ATTAGCCGTA GACTTGGTGT AAATTTATGG 
GGTAGAGCTA AAGACCCAGT AAACAAAAGG AAATACCCTC CAGGTCAACA TGGTATTCTT 
GGATTCAAGA AGTTATCCGA CTTTGGTAAG CAGTTTGCTG CGCATAAGAA ATTTAAGTTT 
TACTATGCGA TTTCAAGTAA GCAGCTCAGA CGTACATTTT TAGATGCTTA TAACAGAAAG 
GGTTATACGG CTGATAATTT TATCGGTATC TTAGAATCGA GATTAAGTTC TGTTTTATAC 
CACTCTGGTC TTGTTCCAAC AATTTACTCA GCAAAGCAGC TCATATCTCA CAAGCACGTT 
ACAGTTAATG ATAAGGTGGT TAACATATCG AGTTATCGAG TGAAGCCAGG TGATATAATA 
AAAATAAGAG AAAGGGCAGC AAAAATCCCT GTAGTAGTAG AGGCTGAACA AAAACAAGAG 
CGCAAGGCTC CGGATTATTT AGAAGCAGAT AGTAAAGAGC ATTCAGTGAA GTATTTGAGG 
TCACCTCAAT ATTCTGAGGT TCCTTATTCA GCAGACATGG AAGTCAATTT AGTAGTAGAG 
TTTTACTCTA GATAG 

 

Protein sequence

MTTVITRKYR ISRRLGVNLW GRAKDPVNKR KYPPGQHGIL GFKKLSDFGK QFAAHKKFKF 
YYAISSKQLR RTFLDAYNRK GYTADNFIGI LESRLSSVLY HSGLVPTIYS AKQLISHKHV 
TVNDKVVNIS SYRVKPGDII KIRERAAKIP VVVEAEQKQE RKAPDYLEAD SKEHSVKYLR 
SPQYSEVPYS ADMEVNLVVE FYSR