Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | WD0005 |
Symbol | |
ID | 2738780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
Kingdom | Bacteria |
Replicon accession | NC_002978 |
Strand | + |
Start bp | 4973 |
End bp | 5767 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637172244 |
Product | type IV secretion system protein VirB9 |
Protein accession | NP_965839 |
Protein GI | 42519924 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.322927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAGGA TATTATTAGT TTTAGCTTTA CTTGTAAGTG GCAATTTAAA CGCATCCATT AATTATAATG AGCCTATTTC TATAGATAGT AGAATAAAGA CTTTTGTGTA TAGCCCTAAT GAAGTATTTA CGGTGGTTTT TAGTCAGGGT TACTATTCTT ATATTGAATT TGCGGAAGGA GAAAAAGTTA AAAATATCGC TGTTGGTGAT GCATCAAGTT GGAAAATTAA TCCTTATGAC AATAAATTGC TTATCATGCC ATTTGAAGTT AGTAGTCGCA CCAACATGAT TATTACGACA ACTAAAAAAA GAAATTACAT TTTTGATTTA ATCTCAAGGC CAAACTACGA TAAATACCCG GATACTGATG CTAAGAAAGT AGATCACGAT TATTCTGCTG AAAAGGATAT ATCTTACGTA GTACGTTTTT ATTATCCTCA AGAAGAAGGT GAATTTGATG TTGATTTAGA TGAGGTTTCT TTACCTACTC AAATGCAATA TACTACAGAC AAGCTAGAAA AAATAATACA AGAAAATGAT ACGAAGTACA ATTATACATA TATTGATGAA GGTGGTAATG CGGATATAGT TCCGATCGAG TTATTTGATG ATGGTTATTT AACCTATTTA AAATTTAGAA ATAATAATAA AATACCTCAG GTTTTTGTAG AAGGGGAGGA TAAACCTTGT AAAAGGCTGT TATTTGGTGA TTATGTTATA ATAAAAGGAG TACATAAAAA GCTATTTATG CGTTATGAAG ATGGTGAAGT TGAAATTATA AATAGGTCAC TTTAG
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Protein sequence | MYRILLVLAL LVSGNLNASI NYNEPISIDS RIKTFVYSPN EVFTVVFSQG YYSYIEFAEG EKVKNIAVGD ASSWKINPYD NKLLIMPFEV SSRTNMIITT TKKRNYIFDL ISRPNYDKYP DTDAKKVDHD YSAEKDISYV VRFYYPQEEG EFDVDLDEVS LPTQMQYTTD KLEKIIQEND TKYNYTYIDE GGNADIVPIE LFDDGYLTYL KFRNNNKIPQ VFVEGEDKPC KRLLFGDYVI IKGVHKKLFM RYEDGEVEII NRSL
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