Gene MCA_Mc23SA details

Gene Information

• Locus tag: MCA_Mc23SA
• Symbol: rrlA
• ID: 3104047
• Type: rRNA
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 790187
• End bp: 793090
• Gene Length: 2904 bp
• GC content: 54%
• IMG OID: 640695692
• Product: 23S ribosomal RNA

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.10158
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GGTCAAGTGA ATAAGCGCAT ACGGTGGATG CCTAGGCGGT AAGAGGCGAA GAAGGACGTG 
GCAGCCTGCG AAAAGCTTCG GGGAGGTGGC AAACAACCTG TGATCCGGAG ATGTCCGAAT 
GGGGCAACCC AGCCGGTTTT AACCGGCTAT CGCCGACTGA ATCCATAGGT CGGCGAGGCG 
AACCCAGGGA ACTGAAACAT CTAAGTACCT GGAGGAAAAG AAATCAACCG AGATTCCCTT 
AGTAGTGGCG AGCGAACGGG GAGCAGCCCT TAAGCATCAA TGTTTTTAGT AGAAGCGTCT 
GGAAAGTCGC ACCATAGAGG GTGATAGTCC CGTATACGAA AGGAACGCTG GTGTGAAGAC 
GAGTAGGGCG AGGCACGTGA AACCTTGTCT GAACATGGGG GGACCATCCT CCAAGGCTAA 
ATACTCCTTA CCGACCGATA GTGAACCAGT ACCGTGAGGG AAAGGCGAAA AGAACCGCGG 
TGAGCGGAGT GAAATAGAAC CTGAAACCGT ATGCGTACAA GCAGTGGGAG CCTCGCAAGG 
GGTGACTGCG TACCTTTTGT ATAATGGGTC AGCGAGTTAT TCTCAGTGGC AAGCTTAACC 
GAATAGGGGA GGCGTAGCGA AAGCGAGTCT GAATAGGGCG AATGAGTCGC TGGGAATAGA 
CCCGAAACCG GGCGAGCTAT CCATGGCCAG GCTGAAGGTG AGGTAAAACT TACTGGAGGG 
CCGAACCGGG ATCTGTTGAA AAAGATTCGG ATGAGCTGTG GATAGGAGTG AAAGGCTAAA 
CAAGCTCGGA GATAGCTGGT TCTCCTCGAA AGCTATTTAG GTAGCGCCTC GTGTCTCACT 
CTCGGGGGTA GAGCACTGTT TCGGCTAGGG GGTCGTCTAG ATTTACCAAA CCGATGCAAA 
CTCCGAATAC CGGGAAGTGC AATCACGGGA GACACACGGC GGGTGATAAG GTCCGTCGTG 
AAAAGGGAAA GAGCCCAGAC CGCCAGCTAA GGTCCCCAAA TCAGGCTTAA GTGGAAAACG 
ATGTGGGAAG GCACAGACAG CCAGGAGGTT GGCTTAGAAG CAGCCACCCT TTAAAGAAAG 
CGTAATAGCT CACTGGTCGA GTCGGCCTGC GCGGAAGATT CAACGGGGCT TAAAGCCTGT 
ACCGAAGCTG CGGATTCACG CGTTGCGTGA GTGGTAGAGG AGCGTTCCGT AGGCCTGTGA 
AGGTCAACTG AGAAGTTGGC TGGAGGTATC GGAAGTGCGA ATGCTGACAT AAGTAACGAC 
AAAACGGGTG AAAAACCCGT TCGCCGAAAG CCCAAGGTTT CCTGCGCAAC GCTAATCGGC 
GCAGGGTTAG TCGGCACCTA AGGCGAGGCC GAAAGGCGTA GTCGATGGAA AACCGGTTAA 
TATTCCGGTA CCGGCTGCAA CTGCGATGGG GTGACGGAGA AGGCTAGGTC AGCCGGGTGT 
TGGACGTCCC GGTTTAAGCG TGTAGGCAGA CTCTTTAGGC AAATCCGGAG GGTCAATGCT 
GAGGCGTGAT GACGGTGCTG AAGGCGACTT CAGCCGAAGT GATTGATGCC AGGCTTCCAA 
GAAAAACCTC TAAGCTTCAG GTTGCAGGCG GCCGTACCAA AACCGACACA GGTGGGCAGG 
ATGAAAATTC TCAGGCGCTT GAGAGAACTC GGGTGAAGGA ACTAGGCAAA ATGGTACCGT 
AACTTCGGGA GAAGGTACGC CCTTGGTAGG TGAAGTGGCA TGCCCATGGA GCCGAAGGGG 
GTTGCAGTGA AACGGTGGCT GCGACTGTTT ATTAAAAACA CAGCACTCTG CAAAGACGAA 
AGTCGACGTA TAGGGTGTGA CGCCTGCCCG GTGCCGGAAG GTTAATTGAT GGGGTCAGCG 
CAAGCGAAGC TCTTGATCGA AGCCCCGGTA AACGGCGGCC GTAACTATAA CGGTCCTAAG 
GTAGCGAAAT TCCTTGTCGG GTAAGTTCCG ACCTGCACGA ATGGCGTAAC GATGGCCACA 
CTGTCTCCAC CCGGGACTCA GTGAAATTGA ACTTGCTGTG AAGATGCAGT GTACCCGCGG 
CTAGACGGAA AGACCCCGTG AACCTTTACT ATAGCTTTGC ACTGGACTTT GAATTGACTT 
GTGTAGGATA GGTGGGAGGC TGAGAAGCCC GGACGCCAGT TCGGGTGGAG CCGACCTTGA 
AATACCACCC TGGTGAATTT GGAGTTCTAA CCCAGGTCCG TGATCCGGAT CGGGGACCGT 
GCATGGTGGG TAGTTTGACT GGGGCGGTCT CCTCCCAAAG CGTAACGGAG GAGCACGAAG 
GTGCGCTCAG CGTGGTCGGA AATCACGCAA AGAGTGTAAG GGCAAAAGCG CGCTTGACTG 
CGAGACGAAC GAGTCGAGCA GGTACGAAAG TAGGTCCTAG TGATCCGGTG GTTCTGTATG 
GAAGGGCCAT CGCTCAACGG ATAAAAGGTA CTCCGGGGAT AACAGGCTGA TACCGCCCAA 
GAGTTCATAT CGACGGCGGT GTTTGGCACC TCGATGTCGG CTCATCACAT CCTGGGGCTG 
TAGCCGGTCC CAAGGGTATG GCTGTTCGCC ATTTAAAGTG GTACGCGAGC TGGGTTTAGA 
ACGTCGTGAG ACAGTTCGGT CCCTATCTGC CGTGGGCGTT GGAGATTTGA GGGAAGTTGC 
TCCTAGTACG AGAGGACCGG AGTGAACGAA CCGCTGGTGT TCCGGTTGTC ATGCCAATGG 
CATTGCCGGG TAGCTATGTT CGGACAGGAT AACCGCTGAA AGCATCTAAG CGGGAAGCCC 
CTCCCAAGAT GAGATCTCCC TGGGACCGTG AGTCCCCTGA AGGGCCCTGG AAGACCACCA 
GGTTGATAGG TCGGGTGTGG AAGCTCAGTA ATGGGTGAAG CTAACCGATA CTAATGGCCC 
GTGAGGCTTG ACCATATAAC ACCC 

 

Protein sequence