| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2947 |
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| Symbol | hup |
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| ID | 3103178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 3128090 |
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| End bp | 3128377 |
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| Gene Length | 288 bp |
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| Protein Length | 95 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637172074 |
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| Product | prophage MuMc02, DNA-binding protein HU |
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| Protein accession | YP_115338 |
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| Protein GI | 53802893 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.437492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACCAAT CCCAACTCAT CAACGCCATC CATGAAGACG CCAATGGATC GCTGACCAAA
ACCGTGATTC AGCGCGTCCT GATCGCCCTG GCGAATGTCG CTCAGGAAGC CCTGGCCAAC
GGCGACGAAG TGACGATCCC CGGCGTTGCC AAGCTCACCG TCAAGGAGCG CGCGGCGCGC
ACCGGCCGCA ATCCGCAGAC CGGTGAGACG GTGGAGATTC CAGCCAAGCG AGTGGCGCGC
GCATCGTTCG TCAAGGCGCT CAAAGAGCGC GTTCAAGGCG GGGCTTGA
|
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| Protein sequence | MNQSQLINAI HEDANGSLTK TVIQRVLIAL ANVAQEALAN GDEVTIPGVA KLTVKERAAR
TGRNPQTGET VEIPAKRVAR ASFVKALKER VQGGA
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