| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2789 |
|---|
| Symbol | |
|---|
| ID | 3104000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 2980594 |
|---|
| End bp | 2981139 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637171919 |
|---|
| Product | NLP/P60 family protein |
|---|
| Protein accession | YP_115184 |
|---|
| Protein GI | 53803047 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.142626 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTGG TTCCGCTCAT GCGTTTCGTC TTGCTGCTGC TTCCCGCGCT GCTGTCCGGC
TGCGCGAGCA CGCCCGAGGT GACGCGGAGT GCACCGGCTG CCGCCAATGG CCACGTCGTG
CCCTATGCGC TGAGTCTGCA GGGGGTGCCC TATGTGTGGG GCGGAACCTC ACCGGCACAG
GGATTCGACT GCAGCGGTTT CGTCCAGCAC GTCTATCGGC GACACGGCAT CGACCTGCCG
CGCACAGCCC GCGAGATGGC GAGCAAGCTG CCGGAGGTTC CCAAGCATTG CCGCCTTCCC
GGCGACCTCC TGTTTTTCCG GACCGACGGA CGCTCGTATT CCCACGTCGG CATCTACATC
GGCAACGAAT CCTTCGTCCA TGCATCCAGC AGCCATGCCG GCGTCATGAT TTCCAGCCTG
AGCAAACCGT ACTGGCTGAG CCGCTTCCTG GGCGTGCGGC GGCCGCATTC CCGATACCGG
TTGCCGGACG ACGCCATGGC CGCCGCCGAT CACCGCCAAC GAACCCAACG GAGAGGACAT
CCATGA
|
|---|
| Protein sequence | MAVVPLMRFV LLLLPALLSG CASTPEVTRS APAAANGHVV PYALSLQGVP YVWGGTSPAQ
GFDCSGFVQH VYRRHGIDLP RTAREMASKL PEVPKHCRLP GDLLFFRTDG RSYSHVGIYI
GNESFVHASS SHAGVMISSL SKPYWLSRFL GVRRPHSRYR LPDDAMAAAD HRQRTQRRGH
P
|
|---|
| |