Gene MCA2440 details

Gene Information

• Locus tag: MCA2440
• Symbol: smc
• ID: 3104597
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 2619664
• End bp: 2622993
• Gene Length: 3330 bp
• Protein Length: 1109 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637171583
• Product: chromosome segregation SMC protein
• Protein accession: YP_114854
• Protein GI: 53803399
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG1196] Chromosome segregation ATPases
• TIGRFAM ID: [TIGR02168] chromosome segregation protein SMC, common bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.129774
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGATG TGATATTCAA CGGTTCCAGC ACCCGGAAGC CGGCGAGTCA GGCATCGGTG 
GAACTGGTAT TCGACAATTC TTCCGGGCGT GCAGGCGGCG AATACGCCCG ATATCAGCAG 
ATCGCCATCC GGCGCCAGGT GGCCCGCGAC GGCCAGTCGA GCTACTTCCT GAATGGGACG 
CGCTGCCGCC GCAAGGACAT CACCGACCTG TTCCTGGGGA CCGGCCTGGG TGCGCGCAGC 
TATGCCATCA TCGAGCAGGG CACGATTTCC CGGCTGATCG AAGCCAAGCC CGAAGAAATG 
CGCGAGATCA TCGAAGAGGC GGCCGGCATC TCCAAGTACA AGGAGCGTCG GCACGAAACC 
GAGCAACGGA TGCGCCATAC CCGCGAGAAC CTCGAGCGCC TGGCCGATTT GCGCGAGGAA 
CTCGGCAGGC AGTTGGGCCA TCTGCAACGT CAGGCCAGGA AAGCCGAGAA GTTCATAGCC 
CTGCGCGACG AGGAACGCCG GCTCAAGCTC GAACTTCTGG GGCTGCGCTG GCGCGCTCTG 
GAACGGCAGC TCGATCGGCT CAAAGCCGAG CTGACGGACT CTGAGGAGCG GTTCCGTCGG 
CTCACCGGTG AAGAGCACGC CTGCGAGACA CAGCTGGAGG GGCTGAACAG GTTGCGCGGC 
GTTGCACAGG AAAAACTCGA TGTCCAACAG GGGCGGTTCT ATGAGTTGGG CGCGGAAATC 
AGCCGCTTGG ACCAGTTCAT TCGCCATACC CAGAAGTCGC GGGCGGAACT GGTTCAGGAA 
CGGGAGCGGG TCGAGGCCGA ATTGCGGAAA GTCGAATCCG ACCGTGACGA CGACCGTCTC 
CGGCTCGAGG CGGTGCGGGC CGAGGCGGCC GAGCTGAAGG GGAAGCTGGC CTCGCTGGAG 
CAGGAAGTAG CGGAAGCGGT GTCGGTTCGC CAGGCCGCGG AAGCGAAGCT GAAGACGTGC 
CGTGAAGGCT GGGAGGCGCT GGCCGGCGAT CGGCACAGAC TCGAAGGACA AGCGGCTTTG 
CAGCGTTCAC GGCTGCAGCA GCTGCGGGAG CATGGACAGC AGCTCGGCGG GCGGCGCCAG 
CGACTGTTGC AGCAACAGTC GGAACTGGAA AAAGCGCTTG CCGCTCTCGA CGTGCAGGCC 
CACCGTTTAG AGGTGGCAGG TATCGAGGCG GAACGGGAAG AGACCGTCGG CGCGGTCGAA 
GCATTGGCGA GAGAGGCGGA ACGGCAGCGG GACAGGCTGC GCTTCGCGCG TGAGCGCCTG 
AATCCGGCGC GCGCCGGTCT GCATGCCGTG CAGGGGAAGG TCGCTTCGCT CGAGACGCTG 
CAGCGCCACG CGATGGGGCG TGATCGCAGT GCCGCGGCGG CGGTGCTCGA GGCGTGGCAA 
CTGTCGGCGG CCGACCGCCT GGGCGAGAAG ATCGAGGTGG CACCCGGCTG GGAGAATGCC 
GTGGAGACGG TGCTGGGGGC GCATCTCGAA GCCGTGTGTG TCGACAGTCT GGCGCCTTAC 
CTGGCGAACC TCCAGGCTCA GGAGCCTGCT GAGTTTCTGG CCTTATGTGA ATATCGGCAA 
GGACCGGTTG CCGAAGGAAC CGGCGGGCCG CGTCTGCTCG ATTACATTCG AGCTCCCCTG 
GCGCTCGAAG GTCTGCTGGC GGGGATTTAC TGCGCTTCTG ATCCGGCAGA GGCGGCGGAG 
CGGGCGCGTT CGCTGCAGCC GCACGAGTCG GTGGTGACGC CGGGCGGATT CCGTATCGGA 
AAGGGCTGGG TGCTGGCGCA GAAGCCGGAC GCCGGCCATG CCGGGGCGCT TGCCCGCGAG 
CGCGAACTGC GCGAATGTAG GCGGCGAGTC GAAGAGCTGG AAGCGCAGTG CCGGATTCTG 
GAAAGGGAGG CGTCGGAGGC CGAGGTCGAA CTGGAGCGTT TGGAGTCCGA GGGACGCGAG 
GCAAGAAAGA AGGCGGACGA GCTCTCCGCC GGCCTTTCCC TCGCGAGATC CGAGTTGGCA 
GCGGCCGAGG CCAGGAGCGA GCAATGGAGG CATCGCCTGG ACCAGCTCAG CCATGAGCTG 
AACGAATTGG CCGATCAGGA GCTCGAACTC GCCGAGAAGC GTGCCGAGGC CGAGGAAGCC 
TTGCAGACGG CCGAGCGTGA TTCGTTAAGA CTGCAGGATG TGGCGGCGCA GCGGAAGGGG 
GAGTGGCTGG CGCTGGAGGA GGCATTCGCC GCTGCGGAGG CGGCCGAGAA GTCGCTGCAC 
GAGGAGGTTC GTGCACTCCG CAGCCGGGCA GCCATGCTCG AATCGAACGC AGCGTTGACC 
GCTGCCCATC TGCAGCGGCT GGAACAGCAG CACGGCCAGA CCGCGGACCG GCTTGCCGCC 
ATCGTCCAGA GGCTGGCCGA GTCACAGACA CCGCTGGAGG ACGAACGGTC ACGTCTGGAT 
GCGCTGACGG AGGAGCGGGG CGTGCTCGAG GCCGAAATGG CGCGCCAGCG CCGAAGGCTC 
AGCGAACTCG AAGCGGACGT CCGGCGCGTT GCGGGTGAGC GGCAGCGTGC GGAGCATGAA 
CTGGCGGCCT TGCGGGAAAG CATTGGCCAG ATGAAGCTGG CGTGGCAGAC TGCTGAAGTC 
CGCCGCCAGG GGATCGAAGA ACAGTTCGCA GAGCTTGGTG CGGCACCGGC GGCGGTCGTG 
GCGGGGTTGC CAGAAGATGC CGAGGAAAGC GCCTGGCAGG CGTCCGTGAT TCGCCTGGGC 
GAGGAGATCG AACGGCTCGG ACCGGTCAAT CTCACGGCGA TGCAGGAGTA TCAGGAGCAG 
GAAGCGCGTC AGCGCTATCT TGAGGAACAA GACCGGGATC TCACCGAGTC GCTGGCGACA 
CTGGAGCAGG CTATCGAAAA GATCGACCGG GAGTGTCGGG CCAGGTTCAA GGAGACCTTC 
GAAAAGATCA ATGCCGGTTT TCAGCGCATG TTTCCCAAAC TTTTCGGCGG AGGGAAAGCG 
GCCCTCGAGC TCACGGAAAA CAACTTGCTG AGCGCGGGCG TCAGCGTCAT GGCCCAGCCG 
CCCGGCAAGC GCAACAGTTC GATCCATCTC CTTTCCGGGG GGGAAAAGGC GCTGACGGCG 
GCCGCTCTGG TGTTCGCCAT CTTTGAGTTG AACCCCGCGC CCTTCTGTCT GCTGGACGAG 
GTGGACGCGC CGCTGGACGA TGCCAACGTC GGACGGTTCA GTCAGTTGGT GAAAGAAATG 
TCCGAGAAAG TACAATTTCT CTTCATCACC CATAACAAGG CCACGATGGA AATCGCCCAA 
TATCTGGCCG GGGTCACCAT GCGGGAGCCC GGGGTGTCGC GCATCGTGAC GGTGGACATC 
GATGCGGCGG TTGAACTGGC TTCGGTTTGA 

 

Protein sequence

MADVIFNGSS TRKPASQASV ELVFDNSSGR AGGEYARYQQ IAIRRQVARD GQSSYFLNGT 
RCRRKDITDL FLGTGLGARS YAIIEQGTIS RLIEAKPEEM REIIEEAAGI SKYKERRHET 
EQRMRHTREN LERLADLREE LGRQLGHLQR QARKAEKFIA LRDEERRLKL ELLGLRWRAL 
ERQLDRLKAE LTDSEERFRR LTGEEHACET QLEGLNRLRG VAQEKLDVQQ GRFYELGAEI 
SRLDQFIRHT QKSRAELVQE RERVEAELRK VESDRDDDRL RLEAVRAEAA ELKGKLASLE 
QEVAEAVSVR QAAEAKLKTC REGWEALAGD RHRLEGQAAL QRSRLQQLRE HGQQLGGRRQ 
RLLQQQSELE KALAALDVQA HRLEVAGIEA EREETVGAVE ALAREAERQR DRLRFARERL 
NPARAGLHAV QGKVASLETL QRHAMGRDRS AAAAVLEAWQ LSAADRLGEK IEVAPGWENA 
VETVLGAHLE AVCVDSLAPY LANLQAQEPA EFLALCEYRQ GPVAEGTGGP RLLDYIRAPL 
ALEGLLAGIY CASDPAEAAE RARSLQPHES VVTPGGFRIG KGWVLAQKPD AGHAGALARE 
RELRECRRRV EELEAQCRIL EREASEAEVE LERLESEGRE ARKKADELSA GLSLARSELA 
AAEARSEQWR HRLDQLSHEL NELADQELEL AEKRAEAEEA LQTAERDSLR LQDVAAQRKG 
EWLALEEAFA AAEAAEKSLH EEVRALRSRA AMLESNAALT AAHLQRLEQQ HGQTADRLAA 
IVQRLAESQT PLEDERSRLD ALTEERGVLE AEMARQRRRL SELEADVRRV AGERQRAEHE 
LAALRESIGQ MKLAWQTAEV RRQGIEEQFA ELGAAPAAVV AGLPEDAEES AWQASVIRLG 
EEIERLGPVN LTAMQEYQEQ EARQRYLEEQ DRDLTESLAT LEQAIEKIDR ECRARFKETF 
EKINAGFQRM FPKLFGGGKA ALELTENNLL SAGVSVMAQP PGKRNSSIHL LSGGEKALTA 
AALVFAIFEL NPAPFCLLDE VDAPLDDANV GRFSQLVKEM SEKVQFLFIT HNKATMEIAQ 
YLAGVTMREP GVSRIVTVDI DAAVELASV