| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2153 |
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| Symbol | |
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| ID | 3103727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 2319580 |
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| End bp | 2320659 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637171303 |
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| Product | HlyD family secretion protein |
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| Protein accession | YP_114577 |
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| Protein GI | 53803585 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGCTC AAGCGCACGG TTCGAACTCC CGCAAGACAC TGTCGTATGC CGCCATGGCC
GTCTCGGCCC TGGTCCTGAT GCTGGTCTGG ATGGAGGGCG GCTTCGTCGG CAAGGCGGCG
CCGGGGCTAC GGGCCGAGGA GCAGGCCGAA CCGGTGAGGG GGCAGACGTA CACACTGGCG
CCGCGGACCA TCGCGGAGAC GTCCGCCTGG CCCGCCACCG TGTCCGCCCG GGTCGTCGCC
CGCATCTCGC CCAAGGTCGC GGGACGCATC ACCGAGATCA CCCGCAGGGT GGGTGATCGG
GTGCAGCGGG GCGAAGTCCT GGCGCGGCTG GAAGCCAAGG AGCTGGGTGC CCGGCTCGGC
CAGGCCAGGG CGCAGCTTGC CGCGGCCGAA GCCGAAGCGG TGCGGGCCCG CGCCGAGCTG
ATCCGCAGCG AAAGCCTCTA TGCCAAGGAA GCGGCCACCC GCCAGACACT GGAAACGGCC
CAGGCCGCCG CCCGCGCCGC GAACGCCCAG GTGAAGGCGG CGCAGGATGC CATCGCCGAG
GCCGGTTCGC TGTTCGGCGA GACCGAACTG AAGTCGCCGG TGGATGGCAC GGTGGTGTCG
CGCGAACTCG ACCGGGGCGA CACTGCCATG CCCGGCATGC CGGTGCTGAC GGTGCAGGAA
AGCGGCAGGC TGCGGATCGA GGGCGCGGTC GCCGAGCGCT GCGCGGGGGC GCTGCGGGCC
GGAGCCCCGC TGACGGCACG GGGCGGCTCG CCCGAGCAGG TCTATCCGGT CGAGGTGGAC
GAAGTCGCCC CCGCCGCCGA TCCAGCCACC CGTACGGTCT GGTTCAAGGC GCGCCTGCCC
GATGCCGCGA CCTGGCAGCC GGGCGCCTAT GTCAGTGTGG AACTGCCTTG CGGCCAGCGT
GAGGTGCTGC TGATTCCCGC GGCCGCCGTG ACGCGCATCG GCCAGATCGA GAGCGTGCGC
CTCGTCGAAA AGGACCGTTC CGTACTGCGC CACATCCGTA CCGGCCGGTT CCACGATGGC
CAGCTCGAAG TCCTGGCGGG GCTGGAGCCG GGTGACACCG TCCAGATTCC GAGCCCCTGA
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| Protein sequence | MHAQAHGSNS RKTLSYAAMA VSALVLMLVW MEGGFVGKAA PGLRAEEQAE PVRGQTYTLA
PRTIAETSAW PATVSARVVA RISPKVAGRI TEITRRVGDR VQRGEVLARL EAKELGARLG
QARAQLAAAE AEAVRARAEL IRSESLYAKE AATRQTLETA QAAARAANAQ VKAAQDAIAE
AGSLFGETEL KSPVDGTVVS RELDRGDTAM PGMPVLTVQE SGRLRIEGAV AERCAGALRA
GAPLTARGGS PEQVYPVEVD EVAPAADPAT RTVWFKARLP DAATWQPGAY VSVELPCGQR
EVLLIPAAAV TRIGQIESVR LVEKDRSVLR HIRTGRFHDG QLEVLAGLEP GDTVQIPSP
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