| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2131 |
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| Symbol | |
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| ID | 3103515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 2293572 |
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| End bp | 2296646 |
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| Gene Length | 3075 bp |
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| Protein Length | 1024 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637171281 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | YP_114557 |
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| Protein GI | 53803797 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTGA GCGACATTTC CATCCGCCGG CCGGTGCTGG CGACGGTGAT GAGCCTCGCT
TTGGTGCTGG TCGGGCTGAT GTGTTTCCAG CGCCTGCCGG TGCGGGAGTA TCCCAACATC
GATGCACCCG TAGTCTCGGT CCGCAGCGTC TACAAGGGCG CCAGTTCGGA GGTGATCGAG
AGCCAGGTGA CGCGGCCGCT GGAGGACTCG CTGTCCGGCA TCGAAGGCAT CCGGACCATG
AAGTCGGTCA GCCGCGAAGA AGTCAGCCAG ATCACCCTCG AGTTCAACGT CAGCCGCGAC
CAGGATTCGG CGGCGGCCGA TGTGCGCGAC CGGGTGTCGC GGGTCAGGGC CCGGCTGCCG
CGCGAGATGG ACGAACCCGT CATCAGCAAG ATCGAAGCCG ACGCCCAGCC CATCCTGTGG
CTTGCTTTTT CCAGCGATCG CCATAGTCCC CTGGAAATCA CCGATTTCGC CGATCGTTAC
GTGCAGGACC GGCTGCAGAC TCTGCCGGGC GTCGCCAGTG TGATCATCGG CGGTGAACGC
CGCTATGCGA TGCGGCTGTG GCTCAACCGC GAGCGGATGG CTGCCCACGG GGTGACGGTG
CAGGATGTCG AGGCGGCGCT GCAGAAGCGC AACGTCGAAC TGCCAGGCGG ACGCATCGAA
AGTGCACAGC GCGAGTTCAC CGTATTCAGC GAGACCGACC TGAAAACGGT CGAAGAATTC
AACGCTCTGA TCGTCCGGGA GGTGAACGGT TTTCTGGTGC GGCTGTCGGA CATCGGTCGG
GCCGAGCTGG GGGCGGCGGA TGAGCGCAAC ATCGTGCGGG TGAACGGCAA TCCGGCGGTG
GCGCTGGGGG TGGTCAAGCA GGCCACGGCC AACACCCTGG AGGTGGCCCG GTCGGTGCGG
GCGGAGCTGC CGAAAATCCT GCAAACCCTG CCGGACGGGA TGACGCTGGA AGTGTCCTTC
GACACCTCCC AGTTCATCGA CGAGTCCATC CATTCCGTCT ACAAGACCCT GGCCGAGTCC
CTGGGGTTGG TCACGCTGGT TACCTGGTCG TTTCTGCGTT CGGCGCGCGC TACCCTCATC
CCGTTCGTGA CCATCCCGGT CTCTCTGATC GGCGCCTTCA TCTTCATTTA TGCGCTGGGG
TTTTCGGTCA ACATTCTGAC CCTGCTGGCG TTGGTGCTCG CCATCGGCCT GGTGGTGGAT
GACGCCATCG TGATGATGGA GAACATCTAC CGGCGCATCG AAGGCGGTAC GCCCCCTTTG
AGGGCGGCGG TCGAGGGCAG CCGGGAAATC GCCTTCGCGG TGATTGCCAT GACGTTGACG
CTGGCTTCGG TCTTCGCGCC GCTGGCGTTC ATGAGCGGCA ATACCGGCCG GCTGTTCTCT
GAATTCGCTC TGGCGGTGTC CTGCGCAGTG CTGGTCTCCG GCTTCGTGGC GCTGACGCTG
ACCCCGATGA TGTGCTCACG CCTGTTGAAG CCGGGCGCTA CCGTCAGGAC GGGGCGGGCC
GAAAGCGGCC AGGCCTCCGG TTTCACGGCG CTCTACCGAA AGGGGCTCGA GGCCGCCTTG
CGGCACCGGT GGGCCGTGAT CGGGGTGATG CTGGGTATAG CCGTCGGCGC GGTAGGGCTG
TTCCGTGCGC TCAACGCGGA ACTGTCGCCG CTGGAGGACC GCGGCAACAT CATCATCATG
ATCGCGGCCC CCGAAGGTGC GACCGTAGAG TACACCGACC GTTATGCCCG CGAAGTCGAG
GCGATGGTCC AGCCGATCCC GGAAGTCCGG AGTTATTTCA TGGTGGTGGC GCCGGGGTTG
GACCGGCCCA ACCCGGTGAA TTCCGCGATC GGTTTCGTGC GCCTGAAGCC ATGGCAGCAG
CGCCACCGCT CGCAGCAGGA GATCGCGGCG ACCTTGTTGC CGAAGCTGAT GGCCTTGCCG
GGGGTGATGG CTTTCGCCAT CAATCCTCCT TCCCTGGGGC AGAGCTTCCG CAGCCCGCCC
GTGCAGTTCG TGATCCAGGG GCCGACCTAC GAAAAGCTCG ATGGTGTGGC GGCGCAATTG
GTCGACCGGG CCCGGCAGTA CGCCGGCTTG GTCAACGCCG ATACCGACCT CAAGCTCGAT
AAGCCGCAGA TCAGTGTGCA GGTGAACCGG GAAAAGGCCG CTGACGTCGG GGTCGACGTC
GACGAGATCG GCCGGACGCT GCAGACGCTG CTGGGCGGCC GTCAGGTGAC GCGTTTCAAG
AAAGGCGGTG AACAGTACGA CGTGATCGTC GAACTGGAGG ATGCCGAGCG GATGACCGTG
AACGACGTGG GCTCGATCTA CCTGCGCGGT GCCGGCGGCC GGCTGGTCCA GCTCGCCAAT
CTGGTCGAGA CCCGGGAAAA AGGCGCGGCC AAGGAACTCA ACCATTTCAA CCGGCTGCGT
TCGGCGGTGC TGTCTGCCAG CGTCACCCCC GGCTTCACAT TGGGTGAGGC CCTGTCCTAC
CTCGGCGCAG CGGCGAAGGA GATTCTGCCG GCCGATTTCA AGACCGATCT CGATGGCCAG
TCGCGCGAGT TCGTCGAATC CAGTCGCACG CTCTACCTCA CCTTCGTGTT CGCGCTGCTG
TTCATTTATC TGGTGCTCGC GGCGCAGTTC GAGAGCTTCT CCGATCCGTT CATCATCATG
CTCACTGTGC CACTGGCCGT GACCGGTGCG CTGCTTTCAC TGAAATGGAC CGGTGGCACC
CTCAATGTCT ATAGCCAGAT CGGCATGATC ATGCTGATCG GCCTGGTGAC CAAGAACGGC
ATTCTGATCG TGGAGTTTGC CAACCAGCTC CAACGGGCGG GGCGCGGTCT CGTGGAGGCT
GTGGTCGAGG CCTCCGTGCT GCGCTTCCGG CCGATCCTGA TGACCTCGCT GACCATGATT
CTGGGCGCCC TGCCGCTGGC CTTGTCGTCG GGCGCCGGGG CCGAGAGCCG GCAGCAGATC
GGCTGGGTCA TCGTCGGTGG ACTGCTCATC GGGACCGTAT TCACAGTGTT CGTCATTCCG
GCCGTATATA CCCTGCTGGC CAAGCCTCCG AGGACGCAGG ACGAAGGGAA CGAAAGGGCG
GCCGGCGTGG TCTAG
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| Protein sequence | MTLSDISIRR PVLATVMSLA LVLVGLMCFQ RLPVREYPNI DAPVVSVRSV YKGASSEVIE
SQVTRPLEDS LSGIEGIRTM KSVSREEVSQ ITLEFNVSRD QDSAAADVRD RVSRVRARLP
REMDEPVISK IEADAQPILW LAFSSDRHSP LEITDFADRY VQDRLQTLPG VASVIIGGER
RYAMRLWLNR ERMAAHGVTV QDVEAALQKR NVELPGGRIE SAQREFTVFS ETDLKTVEEF
NALIVREVNG FLVRLSDIGR AELGAADERN IVRVNGNPAV ALGVVKQATA NTLEVARSVR
AELPKILQTL PDGMTLEVSF DTSQFIDESI HSVYKTLAES LGLVTLVTWS FLRSARATLI
PFVTIPVSLI GAFIFIYALG FSVNILTLLA LVLAIGLVVD DAIVMMENIY RRIEGGTPPL
RAAVEGSREI AFAVIAMTLT LASVFAPLAF MSGNTGRLFS EFALAVSCAV LVSGFVALTL
TPMMCSRLLK PGATVRTGRA ESGQASGFTA LYRKGLEAAL RHRWAVIGVM LGIAVGAVGL
FRALNAELSP LEDRGNIIIM IAAPEGATVE YTDRYAREVE AMVQPIPEVR SYFMVVAPGL
DRPNPVNSAI GFVRLKPWQQ RHRSQQEIAA TLLPKLMALP GVMAFAINPP SLGQSFRSPP
VQFVIQGPTY EKLDGVAAQL VDRARQYAGL VNADTDLKLD KPQISVQVNR EKAADVGVDV
DEIGRTLQTL LGGRQVTRFK KGGEQYDVIV ELEDAERMTV NDVGSIYLRG AGGRLVQLAN
LVETREKGAA KELNHFNRLR SAVLSASVTP GFTLGEALSY LGAAAKEILP ADFKTDLDGQ
SREFVESSRT LYLTFVFALL FIYLVLAAQF ESFSDPFIIM LTVPLAVTGA LLSLKWTGGT
LNVYSQIGMI MLIGLVTKNG ILIVEFANQL QRAGRGLVEA VVEASVLRFR PILMTSLTMI
LGALPLALSS GAGAESRQQI GWVIVGGLLI GTVFTVFVIP AVYTLLAKPP RTQDEGNERA
AGVV
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