| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1995 |
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| Symbol | holB |
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| ID | 3104387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 2144583 |
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| End bp | 2145590 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637171150 |
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| Product | DNA polymerase III, delta prime subunit |
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| Protein accession | YP_114427 |
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| Protein GI | 53803740 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGACC CCATCGGTCG TTATCCGTGG CTGGCACCGG CACGCCGCCG GTTGAGGGCG
TATCTGGAGG CGGGACGTTT GCCGCAGGGC TTGCTGATTT CGGGCGCCGC CGGCGTGGGG
AAGGGAGTGC TGGCCGACGA TTTCGCCCGC CGGCTCCTGT GCGCCAGCCC GCCGGCCGAG
GGGGCGTGCG GTACCTGCCA TGCCTGTCGT CTGGTGGTGG CGGGTAATCA TCCGGACTAT
CTTCACATCG AACCGGAGGA AGCCGGTAAA CGTATCACCG TCGAGTTGGT TCGCCGGCTC
ATCGACAGAC TTTCGCTCAA GCCGCAATAT GGCGCTTCCC GGGTCGTGGT CATCCGTCCG
GCACATGCCA TGAACATGGC GGCCGCGAAC AGTCTGTTGA AAACGCTGGA AGAACCCGAC
CCGCATACGC TTTTCCTCCT CATCAGCGAG CGACCCGCGC AACTGCCGGC GACGGTGCTC
AGTCGCTGCC AGCGGCTGGA TGTGAGGCTG CCGGAGCGGG AAGAAGCGTT GCGCTGGCTG
CGTGGACAGG GAGTCGGGGA AGAGGCAGAG GCCTTGCTGG CGATGGCGGG TGGTGCACCG
GTGCGAGCGG TCGAACTGCA TGGGGGGGGC GATCTGGCGC AGCGCAGAAG AATGCTCTTC
GATGACTGGG TGGCCGTGCT GAGGGACGAG AGCGATCCGC TCGCGGTGGC AGAGCGTTGG
GCCAAGGAGG ACGGCGAGAC CGTCCTGATT TGGTTGCGCG GCTGGATCGC GGACCTCATC
CGTATCAGTA GCACTGAAGC ATCGGTTCCG TTGCGCCTGG CCAACGCCGA TCTGGAACCG
GGATTGCGGA AAGCGGCGGC GGGCCTGGAT CTCCGCGCCC TGTTCGCCTG CCTCGACGGT
GTTGATGCGG CCCGCCGCAA TCTGGAGGGC CAGGCCAACC GGCAGCTGGT CATGGAAGAG
ATCCTGATAA ACTGGAACCG GTCGAGACCA CGGGGGGCGA GGCATTGA
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| Protein sequence | MSDPIGRYPW LAPARRRLRA YLEAGRLPQG LLISGAAGVG KGVLADDFAR RLLCASPPAE
GACGTCHACR LVVAGNHPDY LHIEPEEAGK RITVELVRRL IDRLSLKPQY GASRVVVIRP
AHAMNMAAAN SLLKTLEEPD PHTLFLLISE RPAQLPATVL SRCQRLDVRL PEREEALRWL
RGQGVGEEAE ALLAMAGGAP VRAVELHGGG DLAQRRRMLF DDWVAVLRDE SDPLAVAERW
AKEDGETVLI WLRGWIADLI RISSTEASVP LRLANADLEP GLRKAAAGLD LRALFACLDG
VDAARRNLEG QANRQLVMEE ILINWNRSRP RGARH
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