Gene MCA1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1892 
Symbol 
ID3103200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp2035968 
End bp2037116 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content60% 
IMG OID637171049 
Producthypothetical protein 
Protein accessionYP_114327 
Protein GI53803789 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACCG CAGAGCTGAT CGAGGTCTTG AGTCGGGGCG AGGACAGCCG CCATCAGTTC 
AAGGAGAACT TCACCAACCC CGACGCGCTG GCGGCGGAGA TCGTGGCCTT TAGCAACAGC
GCTGGCGGGC AGATTTTCAT TGGCGTGCAA AACGATGGCG TGGTCATCGG CTTGTCGCAC
GCGGACATCG ATCGCCTGAA CCAACTGATC TCAAATGCTT CCTCGCAAAA TGTGCGTCCC
GCGGTGAACC CGCTCACCGA AAACGTGCCG CATCCCAACG GCACGGTGCT GGTGGTGACC
ATCCCGGAGG GCGTGAGCAA GCCCTACATG GATAAGAACG GCGCGATCTG GGTCAAAAAC
GGTGCGGACA AGCGCCGCGC CACCTCGCGC GAGGAGCTCC AGCGCTTGTT CCAGCAGGCC
GGTCTTGTCC ATGCGGATGA GACGCCCGTG GCGGGCTTGG GCGTAGGGGA TATGGACATG
CCCTATTTCG CAGCCTTCTT CGAGCAGCAG TTCGGCGAGC CGCTCACCGA GCACAAGCAG
CCATTGCCGC AGCTTCTGAC CAACATGAAC CTGATGAACC AGGGACGGCT CAACCTGGCC
GGTAGTCTGC TGTTTGCCAG GGCGCCGCAG TATGCGCTAC CCGCCTTCAT CGTCAAGGCC
GTCGCTTTTG TCGGTACAGA CATCGAGGAT CAGCGCTACA TCGACAGCCG CGACATCACC
GGCAAGCTGG CCGATGTGTT TCAGCAGACA CTTGGCTTCA TCGTCGCCAA CACGCGCGCC
GTGCAGGGCG ACCAAGGTTT CAACTCCCAA GGACAGCCCG AGATTCCGCG CATCGTTTGG
GAAGAGCTGG TCGCCAATGC GCTCATTCAC CGCGACTACT TCATCAGTGC GCCGGTACGC
GTGCTGGTGT TTGCCGATCG GGTCGAGATC ATCAGCCCCG GCCATCTGCC CAACCATTTG
ACGGTCGAAA ACATCAAGGC GGGCAATTCG AATATCCGCA ATCCCATCCT CGCATCCTTC
GCGGCCAAGC TCTTGCCCTA CCGAGGTCTG GGTAGCGGGA TCCTGCGCGC ATTGCGCGCT
TGGCCGCAGA TTGAACTGAT CGACGACCGC TATGGCAACC TGTTCAAAGC TATCGTCAAG
CGTACCTGA
 
Protein sequence
METAELIEVL SRGEDSRHQF KENFTNPDAL AAEIVAFSNS AGGQIFIGVQ NDGVVIGLSH 
ADIDRLNQLI SNASSQNVRP AVNPLTENVP HPNGTVLVVT IPEGVSKPYM DKNGAIWVKN
GADKRRATSR EELQRLFQQA GLVHADETPV AGLGVGDMDM PYFAAFFEQQ FGEPLTEHKQ
PLPQLLTNMN LMNQGRLNLA GSLLFARAPQ YALPAFIVKA VAFVGTDIED QRYIDSRDIT
GKLADVFQQT LGFIVANTRA VQGDQGFNSQ GQPEIPRIVW EELVANALIH RDYFISAPVR
VLVFADRVEI ISPGHLPNHL TVENIKAGNS NIRNPILASF AAKLLPYRGL GSGILRALRA
WPQIELIDDR YGNLFKAIVK RT