| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1717 |
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| Symbol | |
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| ID | 3102436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 1833082 |
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| End bp | 1834632 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637170878 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_114156 |
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| Protein GI | 53803970 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02645] putative thymidine phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.124603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGACG AAGAGTCGAT CAAGACTCGC CTGAAGCTCC GGCCGGTGGC GATCGATACG
TACCGGGAAA ACGTGGCGTA CCTGCACCGC GAATGTTCGG TGTATCGGGC GGAGGGCTTT
CAGGCGCTCG CCAAGATCCG GGTGGGCTGC AACGGCAAGC AGATCGAGGC GGTGCTGAAC
GTGGTGGACG ATGTCTGCAT CGTGGCCCCG GACGAGCTGG GCCTGTCGGA GCAGGCATTC
CAGCGTTTCG GCGAACCCGC GGGCCAGCTC GTGAACGTGG CGCAGGCCGA GCCTCCACTA
TCCATGGACG GCGTCCGGCG CAAGATCGGC GGGGAACGGC TGGATTACGG CGATTATCAG
GCCATTACCA GCGACATTGC CAAAGGGCGC TATTCCAAGA TGGAGATGGC CGCGTTCCTG
GTGGCGACCG GCCAGAACGG GTTGGATCGT GACGAAGTGC TGTCGCTGAC GCGTGCGATG
CTGGAAACCG GGGTGAGATT GAGCTGGAAT GAGCCGCTGG TGGCCGATAA ACACTGCATC
GGTGGCATTC CGGGCAACCG GACGTCGTTG TTGATCGTGC CCATCGTGGC GGCGCACGGG
ATGCTGATCC CCAAGACCTC CAGCCGCGCC ATCACTTCGC CTGCCGGGAC GGCGGACACC
ATGGAAGTGC TCGCGCGCAC CGATCTGGCG CCGGAATCAC TCGACCGGCT GGTGCGGATG
GAACGGGGTT GTCTGGCGTG GGGTGGCACC ACTCGCCTGG CTCCGGTCGA CGATATGCTC
ATCTCGGTCG AACGTCCCCT CGGCATCGAT TCTCAAGGCC AGATGGTCGC TTCTATTCTG
TCGAAGAAGT TGGCGGCCGG CGCCACCCAT CTGCTGTTGG ACATTCCGGT CGGCCCTACC
GCCAAGGTGC GGCAGATGCG CGATGCCATG AGTCTCAGGA AACTGTTCGA ATACGTCGGT
GACCGCGTCG GCCTGCATCT GGAAGCCGTG ATCACCGACG GTGCCCAGCC GGTCGGCCGC
GGCATCGGTC CGGTGCTGGA GGTGCGGGAC GTCATGCAGG TGCTGGAGAA CGATCCGGAA
GCGCCGGTCG ATCTGCGCGA AAAATCCTTG CGCCTGGCCG GTCGCATCCT CGAGTTCGAT
CCCGACGTCC GGGGCGGCTT CGGCTATTCG ATCGCTCGAG ACATCCTGGA ATCGGGCCGG
GCGCTCGCCA AGATGCACCG GATCATCGAT GCCCAGGGCC GGCAGGAGCG GCGCCTGGAG
CCCGGCAGGC TGGTCTTCGA GGTGCGGGCG GAGCGGGCCG GCGTGGTGGT CGGGATCGAC
AATTTTTTCT TGGCGCAGAC GGCCCGCCTC GCCGGCGCAC CGATGAGCCG AGGGGCAGGC
GTGGATCTGT TGAACAAGCT GGGCGATACG GTAGAGGAGG GGCAGCCGCT CTACCGGGTC
TACGCGGAAT TCCCTGCCAA TTTCGAATTC GCCCGGGAGT TCACGCGCAC GAGAAGCGGT
TACAACATCG GAGATGCCGC TTTCCTGACC AAGACTCACA TGGAGTTCTG A
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| Protein sequence | MSDEESIKTR LKLRPVAIDT YRENVAYLHR ECSVYRAEGF QALAKIRVGC NGKQIEAVLN
VVDDVCIVAP DELGLSEQAF QRFGEPAGQL VNVAQAEPPL SMDGVRRKIG GERLDYGDYQ
AITSDIAKGR YSKMEMAAFL VATGQNGLDR DEVLSLTRAM LETGVRLSWN EPLVADKHCI
GGIPGNRTSL LIVPIVAAHG MLIPKTSSRA ITSPAGTADT MEVLARTDLA PESLDRLVRM
ERGCLAWGGT TRLAPVDDML ISVERPLGID SQGQMVASIL SKKLAAGATH LLLDIPVGPT
AKVRQMRDAM SLRKLFEYVG DRVGLHLEAV ITDGAQPVGR GIGPVLEVRD VMQVLENDPE
APVDLREKSL RLAGRILEFD PDVRGGFGYS IARDILESGR ALAKMHRIID AQGRQERRLE
PGRLVFEVRA ERAGVVVGID NFFLAQTARL AGAPMSRGAG VDLLNKLGDT VEEGQPLYRV
YAEFPANFEF AREFTRTRSG YNIGDAAFLT KTHMEF
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