| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1556 |
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| Symbol | atpD |
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| ID | 3102213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 1656884 |
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| End bp | 1658260 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637170729 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_114011 |
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| Protein GI | 53804131 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.392782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGAGC GAGCCCCCGT CATCGGCAGC ATCGCCGAGG TCCACGGACC GGTGGTGGTG
ATTGCCTGCC AGACGCTGCC GCCGCTCCGG CAGGCCCTGT ACAGCCGGAT CGATCATGAA
ACCTATCTAT TCGAAGTTCA CCAGCATCTC GATGAAAGCC ATGTTCGGGC CGTGACGCTA
CACCGTACTA CGGGTCTCAA ACGCGGCATG GTGGTTCACG ATCTTGGAGC GCCGCTGCAG
GTCCCGGTGT CCACAGCCTG CCTGGGCCGC CTGGTGAACC TTTTCGGCGA ACCGCTGGAC
AACGGCCCGC CGCTACCCGA CTCCGAGTAC CGCGACGCCC ACCGTCCGCC GGCACCGCTG
GCCGAATCGC GCGCTGCCGG TGAAACGCTG GAAACCGGCA TCAAGGTCAT CGACCTGCTC
TGCCCTTTCG CCCGCGGCGG CAAGACCGGC CTGTTTGGCG GTGCGGGCGT GGGGAAAACG
GTGTTGATCA TGGAATTCAT GCACGCCGTC AGCGCCCTGC ACCGGGGAGT CTCGGTCTTC
GCCGGCGTGG GTGAGCGCAT CCGCGAGGGC CACGAACTGT GGCGCGAACT GGCCGAGGCC
GGCGTCCTCG ACAAGTCGCT GCTGGTGTAT GGCCAGATGG ACGAGTCGCC CGGCGTCCGC
TTCCGGGTCG GATTGACGGC CCTCACTTAT GCCGAATACC TCCGCGACAC GCTGCACACC
GAAGTGCTGT TCCTCATCGA CAACGTGTTC CGCTTCGTTC AGGCCGGCAG CGAGATTTCC
AGCCTGCTGG GCCGGATGCC TGCGACCGTG GGTTACCAGC CGACCCTGGC CACCGAGGTA
GCGGAAATCG AGGAACGCAT CACTTCGACC GCCGCCGGTG CGATCACCTC CGTACAGGCC
GTGTACGTAC CCGCTGACGA CATGACCGAC CCGGCCGTGG CCGCCATTCT CAGCCACCTC
GACACCACCG TAGTGCTGTC GCGCGTCCAG GCAGGCAAGG GCATCTATCC GGCGATCGAC
CCGCTGGCCT CGACCAGCCG GCTGATGGAC CGCCATGTGA TCGGTGACCG TCACTACGGG
ATCGCCCAGG GGGTGCGGGA ACATCTGGCC CGCTATCGGG AGCTGGAAGA CATCATCACC
ATGTTGGGAA TCGAGGAACT CTCCCCCCAG GACCGGCTCC TCGTGCTGCG GGCACGCAAG
CTTCAGCGCT ACCTGACCCA GCCTTTCTTC GTCACCGCGC AGCACACTGG GCTGGCCGGC
GTCAGTGTCC CACTCGACGC CACGCTCGGC GATTGTGAAG GATTTCTGAC CGGGCGCTAC
GACGACCTGG CGGAAGAAGA CTGCTACATG CGCGGCACAC TCGGCCGCGG TTCATGA
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| Protein sequence | MQERAPVIGS IAEVHGPVVV IACQTLPPLR QALYSRIDHE TYLFEVHQHL DESHVRAVTL
HRTTGLKRGM VVHDLGAPLQ VPVSTACLGR LVNLFGEPLD NGPPLPDSEY RDAHRPPAPL
AESRAAGETL ETGIKVIDLL CPFARGGKTG LFGGAGVGKT VLIMEFMHAV SALHRGVSVF
AGVGERIREG HELWRELAEA GVLDKSLLVY GQMDESPGVR FRVGLTALTY AEYLRDTLHT
EVLFLIDNVF RFVQAGSEIS SLLGRMPATV GYQPTLATEV AEIEERITST AAGAITSVQA
VYVPADDMTD PAVAAILSHL DTTVVLSRVQ AGKGIYPAID PLASTSRLMD RHVIGDRHYG
IAQGVREHLA RYRELEDIIT MLGIEELSPQ DRLLVLRARK LQRYLTQPFF VTAQHTGLAG
VSVPLDATLG DCEGFLTGRY DDLAEEDCYM RGTLGRGS
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